Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 OR4A17P-201ENST00000526032 904 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 YWHABP2-201ENST00000540201 713 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 OR11H3P-201ENST00000554547 982 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 AP001357.1-201ENST00000586304 1053 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 AC135068.5-201ENST00000624197 983 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 AC079776.5-201ENST00000641920 211 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 MIPEPP2-201ENST00000422560 1819 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 AC104964.3-201ENST00000606115 2860 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 ZNF733P-202ENST00000444809 1573 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 AL359715.3-201ENST00000569267 2123 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 AC079097.1-201ENST00000512187 1399 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 CR383656.5-201ENST00000547616 1340 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 SNORA58B-201ENST00000364259 136 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 RNU1-43P-201ENST00000365052 165 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 NPM1P38-201ENST00000403835 865 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 DUTP5-201ENST00000406790 469 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AL389915.2-201ENST00000454576 441 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AC108751.3-201ENST00000461814 1020 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 GLUD1P3-202ENST00000508551 200 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 RNU6-1334P-201ENST00000516032 105 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 RNA5SP373-201ENST00000517271 95 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AC127381.1-201ENST00000555979 939 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AL139124.1-201ENST00000609123 421 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 RPSAP73-201ENST00000614820 330 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 MIR7155-201ENST00000615925 56 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AC022960.2-201ENST00000616300 666 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 AL353796.1-201ENST00000561542 3241 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 MRRFP1-201ENST00000435941 1675 ntBASIC4.77□□□□□ -1.65
CLCF1Q9UBD9 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 RPL23P2-201ENST00000320371 421 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 RNU1-146P-201ENST00000364015 165 ntBASIC4.76□□□□□ -1.65
CLCF1Q9UBD9 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms