Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL355375.1-201ENST00000405686 392 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 HMGB1P13-201ENST00000406019 642 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 U3.35-201ENST00000408405 208 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL590139.1-201ENST00000416267 400 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 CCDC58P2-201ENST00000417131 366 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 RN7SL714P-201ENST00000487050 298 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC114967.1-201ENST00000504890 259 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC020593.1-201ENST00000507399 299 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC106800.3-201ENST00000511389 308 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 CTSLP2-201ENST00000580501 394 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 HCG18-243ENST00000602498 327 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL109653.1-201ENST00000603091 248 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC233280.2-201ENST00000603917 1070 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC016252.1-201ENST00000609721 474 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC126915.2-201ENST00000610957 190 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 MIR4679-1-201ENST00000637619 75 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 OR8B1P-202ENST00000641132 1178 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 TMC3-202ENST00000558726 4644 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 GPR107-203ENST00000372410 6991 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 KPNA2P1-201ENST00000458289 1591 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC007618.1-201ENST00000366455 732 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 MIR223-201ENST00000385204 110 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL592310.1-201ENST00000414330 671 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC104837.2-201ENST00000427236 424 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC011242.1-201ENST00000433596 1158 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 MTND1P28-201ENST00000435623 950 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AL358232.1-201ENST00000448030 501 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 BZW1P1-201ENST00000454901 1240 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 RN7SL570P-201ENST00000484405 292 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC108688.1-201ENST00000485817 713 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC017037.1-201ENST00000508460 471 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC009117.1-201ENST00000563948 554 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC005244.1-201ENST00000582566 339 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC092184.1-201ENST00000625042 715 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC007842.1-201ENST00000597336 2039 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AP000766.1-201ENST00000561746 4140 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 AC090220.1-201ENST00000593078 1699 ntBASIC1.93□□□□□ -2.1
HMCN1Q96RW7 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC1.93□□□□□ -2.1
HMCN1Q96RW7 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms