Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SNORA70H-201ENST00000383910 135 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 SNORA70J-201ENST00000384182 135 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 AL121977.1-201ENST00000401636 979 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 RPS17P2-201ENST00000461663 408 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 METTL2B-204ENST00000480046 5743 ntTSL 2 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 SDAD1P1-202ENST00000524156 2051 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 ATP5F1P2-201ENST00000398143 760 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 RPS29P9-201ENST00000440360 171 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 BNIP3P19-201ENST00000605397 577 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 RNA5SP509-201ENST00000364577 119 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 Z97832.1-201ENST00000402490 328 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 RPS26P38-201ENST00000414476 348 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 VN1R21P-201ENST00000426703 765 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 AL137845.2-201ENST00000444292 988 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 AC109464.1-201ENST00000511091 819 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 AC005191.1-201ENST00000603950 358 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
CSMD1Q96PZ7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AL672167.1-203ENST00000641299 2975 ntBASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 VPS8-227ENST00000625842 4969 ntAPPRIS P4 TSL 5 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 TRAV35-201ENST00000390462 330 ntBASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 RPS12P10-201ENST00000427031 377 ntBASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AC073410.1-201ENST00000435125 589 ntBASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 SCARNA22-201ENST00000503991 125 ntBASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AL163952.1-202ENST00000569625 600 ntBASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AC011477.5-201ENST00000586571 259 ntBASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AC114781.5-201ENST00000615297 108 ntBASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 SMG1P7-201ENST00000565246 2704 ntBASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 NANOGP9-201ENST00000439890 892 ntBASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 ARL2BPP10-201ENST00000446487 531 ntBASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AC119751.5-201ENST00000514077 770 ntBASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AL672167.1-205ENST00000641112 3080 ntBASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 UGT2B24P-201ENST00000514441 1597 ntBASIC4.26□□□□□ -1.73
CSMD1Q96PZ7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms