Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 OR9G4-201ENST00000302957 984 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 SNORA16A-201ENST00000384342 137 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 MIR551A-201ENST00000385042 96 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 DBIP1-201ENST00000401435 260 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 RPL21P67-201ENST00000402896 478 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 GAPDHP42-201ENST00000406848 981 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 BX510359.3-201ENST00000422168 306 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 AC090018.1-201ENST00000434369 367 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 AC012075.1-201ENST00000436549 580 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 TCEA1P3-201ENST00000443005 880 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 SPRYD7P1-201ENST00000443861 570 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 NPM1P19-201ENST00000450070 712 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 SIAH1P1-201ENST00000479411 923 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 RN7SL184P-201ENST00000488308 297 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 AC100784.1-201ENST00000522790 310 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 AC107993.1-201ENST00000591343 684 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 CASC19-248ENST00000641674 1356 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 RN7SKP162-201ENST00000363605 345 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 NPM1P4-201ENST00000414095 812 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AL133173.1-201ENST00000423458 397 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC013410.1-201ENST00000436223 1232 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 RPL12P18-201ENST00000437175 325 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AL390119.1-201ENST00000440329 312 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC021660.1-201ENST00000465006 554 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AL133445.1-201ENST00000467051 452 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC092754.1-201ENST00000472975 479 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 NIFKP7-201ENST00000503365 834 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 MORF4L2P1-201ENST00000503761 858 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 MRPS21P7-201ENST00000566937 238 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC015720.2-201ENST00000567709 334 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 NPM1P45-201ENST00000583151 559 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC009027.1-201ENST00000604510 479 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AL139041.1-201ENST00000605480 610 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 MIR6839-201ENST00000620425 113 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AP003400.3-201ENST00000624904 346 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC114947.2-201ENST00000565748 2125 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC022417.1-201ENST00000624768 1303 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 AC003985.2-201ENST00000562268 1669 ntBASIC5.47□□□□□ -1.53
C9orf72Q96LT7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.47□□□□□ -1.53
C9orf72Q96LT7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
C9orf72Q96LT7 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.46□□□□□ -1.53
C9orf72Q96LT7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
C9orf72Q96LT7 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
C9orf72Q96LT7 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
C9orf72Q96LT7 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
C9orf72Q96LT7 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms