Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 AL359922.2-201ENST00000581788 3017 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 AC097634.1-201ENST00000604491 2467 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 Y_RNA.132-201ENST00000363421 102 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 Y_RNA.142-201ENST00000363491 102 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 RN7SKP130-201ENST00000364924 301 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 Y_RNA.419-201ENST00000384041 102 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 Y_RNA.465-201ENST00000384293 102 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 Y_RNA.582-201ENST00000391023 95 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 CNN3P1-201ENST00000401596 935 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 AHCYP8-201ENST00000425108 209 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 RPSAP32-201ENST00000432681 526 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 AC007383.1-201ENST00000445875 636 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 AC069528.1-202ENST00000482888 637 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 RPS27AP16-201ENST00000492222 470 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 RPL12P7-201ENST00000493832 494 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 IGBP1P5-201ENST00000507524 1000 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 HMGB1P46-201ENST00000520062 610 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 SAA3P-201ENST00000533267 365 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 RN7SL753P-201ENST00000581238 290 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 UBE2L4-201ENST00000587688 464 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 AC124303.1-201ENST00000605703 360 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 RPSAP68-201ENST00000625020 438 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 NBPF8-201ENST00000583271 5330 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 MELK-208ENST00000536987 2125 ntTSL 2 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 ZNF733P-202ENST00000444809 1573 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 MTND5P16-201ENST00000460269 1703 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 MTND5P11-201ENST00000511037 1812 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 RNA5SP308-201ENST00000362532 115 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 OR1L1-202ENST00000373686 1083 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 RNU5A-6P-201ENST00000384136 116 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 RNU6-784P-201ENST00000384330 106 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 RNU6-796P-201ENST00000391086 107 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 AC000089.1-201ENST00000424559 801 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 CHCHD3P1-201ENST00000425516 676 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 AL050321.1-201ENST00000432363 400 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 HMGB3P9-201ENST00000441799 583 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 AC007327.1-201ENST00000447461 264 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 MRPL35P2-201ENST00000448009 511 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 AC026336.1-201ENST00000466577 351 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 BTF3P13-201ENST00000513224 490 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 AC093816.1-201ENST00000515076 913 ntBASIC8.17□□□□□ -1.1
TRIM47Q96LD4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC8.17□□□□□ -1.1
TRIM47Q96LD4 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms