Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD4Q6ZW05 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 RPL11P4-201ENST00000332269 436 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 RNU5B-1-201ENST00000363286 116 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 RNA5SP485-201ENST00000365053 119 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 RNA5SP77-201ENST00000365394 120 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 RNU6-1263P-201ENST00000384601 106 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC245096.1-201ENST00000413104 546 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 RPL5P2-201ENST00000429598 854 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 ARMC4P1-201ENST00000438905 707 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC000041.1-201ENST00000439655 175 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AL157827.1-201ENST00000447622 132 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC079080.1-201ENST00000479841 822 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 RPS12P31-201ENST00000491419 398 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 KHDC1P1-201ENST00000511053 508 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC093752.1-206ENST00000511823 336 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 EIF4A2P5-201ENST00000529914 499 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AP003717.3-201ENST00000544832 1180 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC023824.3-201ENST00000569003 562 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 MIR212-201ENST00000586026 110 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC012254.4-201ENST00000588843 273 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC025175.1-201ENST00000606482 759 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC093783.1-201ENST00000612976 329 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 SNX18P12-201ENST00000624821 759 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 THAP12P9-201ENST00000503971 2360 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC093849.1-201ENST00000563631 2209 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 AC114774.1-201ENST00000507410 1770 ntBASIC5.5□□□□□ -1.53
PTCHD4Q6ZW05 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC024651.2-201ENST00000562480 2098 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 MTND4P13-201ENST00000402078 1023 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 RN7SKP97-201ENST00000410966 333 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 LIPT1P1-201ENST00000415870 1186 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AL360013.1-201ENST00000419031 858 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC094019.1-201ENST00000434678 472 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms