Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.1□□□□□ -1.91
HSPG2P98160 AL133481.2-203ENST00000607558 139 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
HSPG2P98160 AC039056.2-201ENST00000622261 511 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 AC074101.1-201ENST00000637861 241 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC3.1□□□□□ -1.91
HSPG2P98160 TCP11X1-202ENST00000622971 1372 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC3.1□□□□□ -1.91
HSPG2P98160 ZNF840P-201ENST00000504759 1996 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
HSPG2P98160 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC3.1□□□□□ -1.91
HSPG2P98160 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
HSPG2P98160 CASC19-284ENST00000642142 1868 ntBASIC3.1□□□□□ -1.91
HSPG2P98160 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
HSPG2P98160 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HSPG2P98160 SNORA48.4-201ENST00000391089 134 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 OR13Z1P-201ENST00000416141 834 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.09□□□□□ -1.91
HSPG2P98160 RPL23AP2-201ENST00000471227 466 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HSPG2P98160 IGLVIV-65-201ENST00000517313 360 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.09□□□□□ -1.91
HSPG2P98160 NMNAT1P1-201ENST00000554095 876 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.09□□□□□ -1.91
HSPG2P98160 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HSPG2P98160 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
HSPG2P98160 ALB-220ENST00000621628 1606 ntTSL 5 BASIC3.09□□□□□ -1.91
HSPG2P98160 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HSPG2P98160 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HSPG2P98160 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HSPG2P98160 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HSPG2P98160 SACS-202ENST00000402364 15134 ntTSL 2 BASIC3.09□□□□□ -1.91
HSPG2P98160 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
HSPG2P98160 RPS3AP25-201ENST00000411660 793 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 AL161722.2-201ENST00000434731 981 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 ARL2BPP10-201ENST00000446487 531 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 NUTF2P3-201ENST00000448540 384 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 IGHV5-78-201ENST00000450948 295 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 AC097173.1-201ENST00000505862 819 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 RN7SL703P-201ENST00000578485 302 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HSPG2P98160 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC3.09□□□□□ -1.91
HSPG2P98160 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HSPG2P98160 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HSPG2P98160 NCLP2-201ENST00000416078 1462 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HSPG2P98160 ITPK1-AS1-201ENST00000553639 4701 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HSPG2P98160 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.09□□□□□ -1.91
HSPG2P98160 WBP11P1-201ENST00000562560 1931 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HSPG2P98160 DOCK11P1-201ENST00000553480 5932 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.09□□□□□ -1.91
HSPG2P98160 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HSPG2P98160 SNORA2.3-201ENST00000383920 135 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC3.09□□□□□ -1.91
HSPG2P98160 AL358176.3-201ENST00000420757 454 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.09□□□□□ -1.91
HSPG2P98160 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC3.09□□□□□ -1.91
HSPG2P98160 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.09□□□□□ -1.91
HSPG2P98160 AC104971.1-201ENST00000495117 578 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 AC007016.1-201ENST00000512110 244 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 AC119751.5-201ENST00000514077 770 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.09□□□□□ -1.91
HSPG2P98160 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.09□□□□□ -1.91
HSPG2P98160 AP005901.4-201ENST00000577336 569 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 AC017100.2-201ENST00000584628 355 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC3.09□□□□□ -1.91
HSPG2P98160 BNIP3P19-201ENST00000605397 577 ntBASIC3.09□□□□□ -1.91
HSPG2P98160 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.09□□□□□ -1.91
HSPG2P98160 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.09□□□□□ -1.91
HSPG2P98160 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HSPG2P98160 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HSPG2P98160 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC3.09□□□□□ -1.92
HSPG2P98160 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HSPG2P98160 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HSPG2P98160 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HSPG2P98160 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HSPG2P98160 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
HSPG2P98160 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC3.09□□□□□ -1.92
HSPG2P98160 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC3.09□□□□□ -1.92
HSPG2P98160 RPL21P126-201ENST00000470049 478 ntBASIC3.09□□□□□ -1.92
HSPG2P98160 AC006499.6-201ENST00000511169 607 ntBASIC3.09□□□□□ -1.92
HSPG2P98160 TBCA-207ENST00000520039 157 ntTSL 3 BASIC3.09□□□□□ -1.92
HSPG2P98160 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC3.09□□□□□ -1.92
HSPG2P98160 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC3.08□□□□□ -1.92
HSPG2P98160 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HSPG2P98160 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HSPG2P98160 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HSPG2P98160 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC3.08□□□□□ -1.92
HSPG2P98160 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HSPG2P98160 AC008280.1-201ENST00000418851 412 ntBASIC3.08□□□□□ -1.92
HSPG2P98160 REG1CP-206ENST00000447469 496 ntBASIC3.08□□□□□ -1.92
HSPG2P98160 AC106806.2-201ENST00000509365 500 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 256.8 ms