Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 IGKV3D-25-201ENST00000519599 235 ntBASIC4.03□□□□□ -1.76
CCL20P78556 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.03□□□□□ -1.76
CCL20P78556 HMGB1P42-201ENST00000532126 553 ntBASIC4.03□□□□□ -1.76
CCL20P78556 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.03□□□□□ -1.76
CCL20P78556 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.03□□□□□ -1.76
CCL20P78556 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCL20P78556 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.03□□□□□ -1.76
CCL20P78556 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.03□□□□□ -1.76
CCL20P78556 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.03□□□□□ -1.76
CCL20P78556 AL512430.4-201ENST00000603085 613 ntBASIC4.03□□□□□ -1.76
CCL20P78556 AC008814.1-201ENST00000603797 406 ntBASIC4.03□□□□□ -1.76
CCL20P78556 AL078624.2-201ENST00000605063 554 ntBASIC4.03□□□□□ -1.76
CCL20P78556 AC012676.3-201ENST00000614983 479 ntBASIC4.03□□□□□ -1.76
CCL20P78556 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.03□□□□□ -1.76
CCL20P78556 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC4.03□□□□□ -1.76
CCL20P78556 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CCL20P78556 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCL20P78556 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCL20P78556 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCL20P78556 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.03□□□□□ -1.76
CCL20P78556 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.03□□□□□ -1.76
CCL20P78556 AC005332.5-201ENST00000591222 2919 ntBASIC4.03□□□□□ -1.76
CCL20P78556 SRRM1P3-201ENST00000426911 2678 ntBASIC4.03□□□□□ -1.76
CCL20P78556 HSPA8P18-201ENST00000439846 1928 ntBASIC4.03□□□□□ -1.76
CCL20P78556 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
CCL20P78556 AC093225.1-201ENST00000506867 1408 ntBASIC4.03□□□□□ -1.76
CCL20P78556 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCL20P78556 LINC01109-201ENST00000603837 3081 ntBASIC4.03□□□□□ -1.76
CCL20P78556 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.02□□□□□ -1.77
CCL20P78556 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCL20P78556 PANDAR-201ENST00000629595 1506 ntBASIC4.02□□□□□ -1.77
CCL20P78556 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCL20P78556 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCL20P78556 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCL20P78556 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCL20P78556 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCL20P78556 RNU1-74P-201ENST00000384108 171 ntBASIC4.02□□□□□ -1.77
CCL20P78556 AP000580.1-201ENST00000404439 358 ntBASIC4.02□□□□□ -1.77
CCL20P78556 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.02□□□□□ -1.77
CCL20P78556 BX323845.3-201ENST00000428215 527 ntBASIC4.02□□□□□ -1.77
CCL20P78556 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.02□□□□□ -1.77
CCL20P78556 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.02□□□□□ -1.77
CCL20P78556 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CCL20P78556 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC4.02□□□□□ -1.77
CCL20P78556 RPL6P30-201ENST00000443382 862 ntBASIC4.02□□□□□ -1.77
CCL20P78556 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.02□□□□□ -1.77
CCL20P78556 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.02□□□□□ -1.77
CCL20P78556 AL672138.1-201ENST00000450604 1015 ntBASIC4.02□□□□□ -1.77
CCL20P78556 HMGB1P7-201ENST00000450921 612 ntBASIC4.02□□□□□ -1.77
CCL20P78556 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.02□□□□□ -1.77
CCL20P78556 EIF2S2P5-201ENST00000457635 968 ntBASIC4.02□□□□□ -1.77
CCL20P78556 CST12P-201ENST00000457644 362 ntBASIC4.02□□□□□ -1.77
CCL20P78556 RPS23P6-201ENST00000466136 431 ntBASIC4.02□□□□□ -1.77
CCL20P78556 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCL20P78556 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.02□□□□□ -1.77
CCL20P78556 AC112184.1-201ENST00000505179 312 ntBASIC4.02□□□□□ -1.77
CCL20P78556 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.02□□□□□ -1.77
CCL20P78556 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC4.02□□□□□ -1.77
CCL20P78556 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.02□□□□□ -1.77
CCL20P78556 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.02□□□□□ -1.77
CCL20P78556 AC011270.1-201ENST00000558606 583 ntBASIC4.02□□□□□ -1.77
CCL20P78556 AL078601.3-201ENST00000573303 535 ntBASIC4.02□□□□□ -1.77
CCL20P78556 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.02□□□□□ -1.77
CCL20P78556 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CCL20P78556 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CCL20P78556 BNIP3P35-201ENST00000604530 490 ntBASIC4.02□□□□□ -1.77
CCL20P78556 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCL20P78556 AC118658.2-201ENST00000618697 459 ntBASIC4.02□□□□□ -1.77
CCL20P78556 AC079298.2-201ENST00000623885 459 ntBASIC4.02□□□□□ -1.77
CCL20P78556 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
CCL20P78556 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC4.02□□□□□ -1.77
CCL20P78556 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.02□□□□□ -1.77
CCL20P78556 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.02□□□□□ -1.77
CCL20P78556 CASC19-204ENST00000641001 2055 ntBASIC4.02□□□□□ -1.77
CCL20P78556 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.02□□□□□ -1.77
CCL20P78556 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCL20P78556 CASC19-206ENST00000641028 1430 ntBASIC4.02□□□□□ -1.77
CCL20P78556 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.02□□□□□ -1.77
CCL20P78556 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.02□□□□□ -1.77
CCL20P78556 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.02□□□□□ -1.77
CCL20P78556 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCL20P78556 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCL20P78556 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCL20P78556 KARSP1-201ENST00000451871 1752 ntBASIC4.02□□□□□ -1.77
CCL20P78556 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.02□□□□□ -1.77
CCL20P78556 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.02□□□□□ -1.77
CCL20P78556 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCL20P78556 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCL20P78556 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.01□□□□□ -1.77
CCL20P78556 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
CCL20P78556 AC107068.1-201ENST00000563286 4218 ntBASIC4.01□□□□□ -1.77
CCL20P78556 SSXP3-201ENST00000442971 1300 ntBASIC4.01□□□□□ -1.77
CCL20P78556 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCL20P78556 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCL20P78556 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCL20P78556 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCL20P78556 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CCL20P78556 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CCL20P78556 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCL20P78556 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms