Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 OR5H7P-201ENST00000514084 930 ntBASIC4.8□□□□□ -1.64
CDC42P60953 RFPL4AP5-201ENST00000514977 504 ntBASIC4.8□□□□□ -1.64
CDC42P60953 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.8□□□□□ -1.64
CDC42P60953 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.8□□□□□ -1.64
CDC42P60953 AC027369.2-201ENST00000528030 440 ntBASIC4.8□□□□□ -1.64
CDC42P60953 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.8□□□□□ -1.64
CDC42P60953 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.8□□□□□ -1.64
CDC42P60953 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.8□□□□□ -1.64
CDC42P60953 BNIP3P41-202ENST00000616656 861 ntBASIC4.8□□□□□ -1.64
CDC42P60953 AP001642.1-201ENST00000624727 2117 ntBASIC4.8□□□□□ -1.64
CDC42P60953 AC129915.3-201ENST00000634128 948 ntBASIC4.8□□□□□ -1.64
CDC42P60953 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.8□□□□□ -1.64
CDC42P60953 TMEM30CP-203ENST00000637814 1035 ntBASIC4.8□□□□□ -1.64
CDC42P60953 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDC42P60953 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDC42P60953 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDC42P60953 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDC42P60953 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.79□□□□□ -1.64
CDC42P60953 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDC42P60953 AC011447.7-201ENST00000624228 1590 ntBASIC4.79□□□□□ -1.64
CDC42P60953 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDC42P60953 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDC42P60953 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDC42P60953 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CDC42P60953 RNA5SP477-201ENST00000362639 119 ntBASIC4.79□□□□□ -1.64
CDC42P60953 RNA5SP433-201ENST00000364491 114 ntBASIC4.79□□□□□ -1.64
CDC42P60953 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDC42P60953 SSR1P1-201ENST00000407630 814 ntBASIC4.79□□□□□ -1.64
CDC42P60953 AC013429.2-201ENST00000418798 781 ntBASIC4.79□□□□□ -1.64
CDC42P60953 NAP1L4P2-201ENST00000425958 899 ntBASIC4.79□□□□□ -1.64
CDC42P60953 RPL34P6-201ENST00000432390 345 ntBASIC4.79□□□□□ -1.64
CDC42P60953 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.79□□□□□ -1.64
CDC42P60953 AC005297.1-201ENST00000444765 862 ntBASIC4.79□□□□□ -1.64
CDC42P60953 AL359839.1-201ENST00000451975 1160 ntBASIC4.79□□□□□ -1.64
CDC42P60953 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.79□□□□□ -1.64
CDC42P60953 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.79□□□□□ -1.64
CDC42P60953 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.79□□□□□ -1.64
CDC42P60953 HMGB1P44-201ENST00000508597 572 ntBASIC4.79□□□□□ -1.64
CDC42P60953 AP004607.2-201ENST00000533949 322 ntBASIC4.79□□□□□ -1.64
CDC42P60953 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CDC42P60953 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.79□□□□□ -1.64
CDC42P60953 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.79□□□□□ -1.64
CDC42P60953 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDC42P60953 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.79□□□□□ -1.64
CDC42P60953 AC005252.1-201ENST00000604518 1063 ntBASIC4.79□□□□□ -1.64
CDC42P60953 AL162431.4-201ENST00000604674 411 ntBASIC4.79□□□□□ -1.64
CDC42P60953 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.79□□□□□ -1.64
CDC42P60953 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.79□□□□□ -1.64
CDC42P60953 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDC42P60953 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDC42P60953 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.79□□□□□ -1.64
CDC42P60953 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.79□□□□□ -1.64
CDC42P60953 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDC42P60953 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CDC42P60953 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDC42P60953 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.78□□□□□ -1.64
CDC42P60953 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDC42P60953 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDC42P60953 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CDC42P60953 AC099654.3-201ENST00000447087 1546 ntBASIC4.78□□□□□ -1.64
CDC42P60953 TET1P1-201ENST00000426627 2301 ntBASIC4.78□□□□□ -1.64
CDC42P60953 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.78□□□□□ -1.64
CDC42P60953 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDC42P60953 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.78□□□□□ -1.64
CDC42P60953 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
CDC42P60953 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDC42P60953 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.78□□□□□ -1.64
CDC42P60953 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDC42P60953 MIR375-201ENST00000362103 64 ntBASIC4.78□□□□□ -1.64
CDC42P60953 RNU4-2-201ENST00000365668 141 ntBASIC4.78□□□□□ -1.64
CDC42P60953 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDC42P60953 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.78□□□□□ -1.64
CDC42P60953 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDC42P60953 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.78□□□□□ -1.64
CDC42P60953 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.78□□□□□ -1.64
CDC42P60953 GSTM5P1-201ENST00000434751 660 ntBASIC4.78□□□□□ -1.64
CDC42P60953 AL512637.1-201ENST00000439523 1231 ntBASIC4.78□□□□□ -1.64
CDC42P60953 AL035090.1-201ENST00000454835 332 ntBASIC4.78□□□□□ -1.64
CDC42P60953 AP002884.1-201ENST00000479691 655 ntBASIC4.78□□□□□ -1.64
CDC42P60953 RN7SL423P-201ENST00000486202 304 ntBASIC4.78□□□□□ -1.64
CDC42P60953 RN7SL170P-201ENST00000487098 295 ntBASIC4.78□□□□□ -1.64
CDC42P60953 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.78□□□□□ -1.64
CDC42P60953 AC090638.1-201ENST00000498296 909 ntBASIC4.78□□□□□ -1.64
CDC42P60953 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.78□□□□□ -1.64
CDC42P60953 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.78□□□□□ -1.64
CDC42P60953 AC060775.1-201ENST00000518241 520 ntBASIC4.78□□□□□ -1.64
CDC42P60953 OR10D4P-201ENST00000525892 951 ntBASIC4.78□□□□□ -1.64
CDC42P60953 AC024405.1-201ENST00000532521 1042 ntBASIC4.78□□□□□ -1.64
CDC42P60953 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.78□□□□□ -1.64
CDC42P60953 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.78□□□□□ -1.64
CDC42P60953 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.78□□□□□ -1.64
CDC42P60953 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
CDC42P60953 PCAT14-202ENST00000627127 3935 ntBASIC4.78□□□□□ -1.64
CDC42P60953 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CDC42P60953 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDC42P60953 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.78□□□□□ -1.64
CDC42P60953 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDC42P60953 SCN1A-220ENST00000641603 12506 ntBASIC4.78□□□□□ -1.64
CDC42P60953 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDC42P60953 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms