Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.84□□□□□ -1.47
RAD23BP54727 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAD23BP54727 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAD23BP54727 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RAD23BP54727 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RAD23BP54727 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.84□□□□□ -1.48
RAD23BP54727 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RAD23BP54727 AC120036.2-201ENST00000509729 1474 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
RAD23BP54727 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RAD23BP54727 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
RAD23BP54727 AC079097.1-201ENST00000512187 1399 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAD23BP54727 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.83□□□□□ -1.48
RAD23BP54727 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAD23BP54727 AC003985.2-201ENST00000562268 1669 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 AC005261.2-201ENST00000593427 4258 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 OR1F12-201ENST00000402365 945 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 Z93019.1-201ENST00000416450 973 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 DPPA2P2-201ENST00000418220 897 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.83□□□□□ -1.48
RAD23BP54727 EIF2S2P3-201ENST00000428356 999 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.83□□□□□ -1.48
RAD23BP54727 AC073465.2-201ENST00000440938 498 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.83□□□□□ -1.48
RAD23BP54727 AL356390.1-201ENST00000455684 397 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 AC012123.2-201ENST00000485809 248 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.83□□□□□ -1.48
RAD23BP54727 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.83□□□□□ -1.48
RAD23BP54727 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.83□□□□□ -1.48
RAD23BP54727 RNA5SP362-201ENST00000516048 118 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.83□□□□□ -1.48
RAD23BP54727 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.83□□□□□ -1.48
RAD23BP54727 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAD23BP54727 MIR4660-201ENST00000583549 74 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.83□□□□□ -1.48
RAD23BP54727 AP000769.2-201ENST00000602344 396 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.83□□□□□ -1.48
RAD23BP54727 AC007423.1-201ENST00000605009 627 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 AC000068.2-201ENST00000608816 460 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 AC073869.8-201ENST00000641806 335 ntBASIC5.83□□□□□ -1.48
RAD23BP54727 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAD23BP54727 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RAD23BP54727 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAD23BP54727 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.83□□□□□ -1.48
RAD23BP54727 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAD23BP54727 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAD23BP54727 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAD23BP54727 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAD23BP54727 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
RAD23BP54727 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RAD23BP54727 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.82□□□□□ -1.48
RAD23BP54727 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RAD23BP54727 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RAD23BP54727 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RAD23BP54727 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RAD23BP54727 MIR323A-201ENST00000362199 86 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 RNA5SP319-201ENST00000362768 119 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 RNA5SP435-201ENST00000364044 108 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.82□□□□□ -1.48
RAD23BP54727 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.82□□□□□ -1.48
RAD23BP54727 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.82□□□□□ -1.48
RAD23BP54727 AL358178.1-201ENST00000407698 397 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 RN7SKP206-201ENST00000410823 293 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.82□□□□□ -1.48
RAD23BP54727 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 THAP12P8-201ENST00000447914 2115 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.82□□□□□ -1.48
RAD23BP54727 AL035090.1-201ENST00000454835 332 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.82□□□□□ -1.48
RAD23BP54727 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RAD23BP54727 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.82□□□□□ -1.48
RAD23BP54727 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.82□□□□□ -1.48
RAD23BP54727 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.82□□□□□ -1.48
RAD23BP54727 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RAD23BP54727 OR11H3P-201ENST00000554547 982 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RAD23BP54727 AC009852.2-201ENST00000567898 485 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.82□□□□□ -1.48
RAD23BP54727 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.82□□□□□ -1.48
RAD23BP54727 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.82□□□□□ -1.48
RAD23BP54727 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.82□□□□□ -1.48
RAD23BP54727 AC011445.2-201ENST00000599274 173 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.82□□□□□ -1.48
RAD23BP54727 AC005972.3-201ENST00000606304 481 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.82□□□□□ -1.48
RAD23BP54727 AL359513.1-201ENST00000614364 557 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.82□□□□□ -1.48
RAD23BP54727 AC135068.5-201ENST00000624197 983 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.82□□□□□ -1.48
RAD23BP54727 AC027279.1-201ENST00000568885 4284 ntBASIC5.82□□□□□ -1.48
RAD23BP54727 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RAD23BP54727 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.82□□□□□ -1.48
RAD23BP54727 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
RAD23BP54727 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RAD23BP54727 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RAD23BP54727 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RAD23BP54727 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms