Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CLTCL1P53675 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.32□□□□□ -1.24
CLTCL1P53675 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CLTCL1P53675 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.32□□□□□ -1.24
CLTCL1P53675 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
CLTCL1P53675 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.32□□□□□ -1.24
CLTCL1P53675 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC7.32□□□□□ -1.24
CLTCL1P53675 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC7.32□□□□□ -1.24
CLTCL1P53675 RPS17P2-201ENST00000461663 408 ntBASIC7.32□□□□□ -1.24
CLTCL1P53675 AC006463.2-201ENST00000473326 348 ntBASIC7.32□□□□□ -1.24
CLTCL1P53675 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC7.32□□□□□ -1.24
CLTCL1P53675 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.32□□□□□ -1.24
CLTCL1P53675 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.32□□□□□ -1.24
CLTCL1P53675 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.32□□□□□ -1.24
CLTCL1P53675 AC011487.3-201ENST00000593607 453 ntBASIC7.32□□□□□ -1.24
CLTCL1P53675 AC025857.2-201ENST00000602711 238 ntBASIC7.32□□□□□ -1.24
CLTCL1P53675 AC098935.2-201ENST00000604222 466 ntBASIC7.32□□□□□ -1.24
CLTCL1P53675 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CLTCL1P53675 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC7.32□□□□□ -1.24
CLTCL1P53675 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLTCL1P53675 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.32□□□□□ -1.24
CLTCL1P53675 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLTCL1P53675 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
CLTCL1P53675 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLTCL1P53675 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLTCL1P53675 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
CLTCL1P53675 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLTCL1P53675 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CLTCL1P53675 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CLTCL1P53675 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLTCL1P53675 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
CLTCL1P53675 AL449283.1-201ENST00000602631 3403 ntBASIC7.31□□□□□ -1.24
CLTCL1P53675 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLTCL1P53675 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CLTCL1P53675 RNA5SP191-201ENST00000362585 102 ntBASIC7.31□□□□□ -1.24
CLTCL1P53675 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLTCL1P53675 NPM1P40-201ENST00000412758 733 ntBASIC7.31□□□□□ -1.24
CLTCL1P53675 AC245028.1-201ENST00000423259 256 ntBASIC7.31□□□□□ -1.24
CLTCL1P53675 AC017019.1-201ENST00000426129 261 ntBASIC7.31□□□□□ -1.24
CLTCL1P53675 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC7.31□□□□□ -1.24
CLTCL1P53675 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC7.31□□□□□ -1.24
CLTCL1P53675 AC009220.1-201ENST00000451614 275 ntBASIC7.31□□□□□ -1.24
CLTCL1P53675 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC7.31□□□□□ -1.24
CLTCL1P53675 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC7.31□□□□□ -1.24
CLTCL1P53675 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC7.31□□□□□ -1.24
CLTCL1P53675 BGLT3-201ENST00000564523 994 ntBASIC7.31□□□□□ -1.24
CLTCL1P53675 AC091042.1-201ENST00000579213 173 ntBASIC7.31□□□□□ -1.24
CLTCL1P53675 MIR5096-201ENST00000583713 70 ntBASIC7.31□□□□□ -1.24
CLTCL1P53675 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.31□□□□□ -1.24
CLTCL1P53675 AL731566.2-201ENST00000618971 317 ntBASIC7.31□□□□□ -1.24
CLTCL1P53675 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CLTCL1P53675 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CLTCL1P53675 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.31□□□□□ -1.24
CLTCL1P53675 AC004076.2-201ENST00000620532 3323 ntBASIC7.31□□□□□ -1.24
CLTCL1P53675 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.31□□□□□ -1.24
CLTCL1P53675 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CLTCL1P53675 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CLTCL1P53675 SDAD1P1-202ENST00000524156 2051 ntBASIC7.31□□□□□ -1.24
CLTCL1P53675 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLTCL1P53675 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLTCL1P53675 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLTCL1P53675 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC7.31□□□□□ -1.24
CLTCL1P53675 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
CLTCL1P53675 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CLTCL1P53675 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CLTCL1P53675 SNORA70.6-201ENST00000383934 134 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 IGKV1OR9-1-201ENST00000424370 284 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 RPL19P16-201ENST00000433839 588 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 CEACAMP9-201ENST00000442990 513 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 AC000111.2-201ENST00000448200 210 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.3□□□□□ -1.24
CLTCL1P53675 PSAT1P4-201ENST00000466500 526 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 RN7SL189P-201ENST00000468631 289 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.3□□□□□ -1.24
CLTCL1P53675 AC098976.1-201ENST00000513014 541 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.3□□□□□ -1.24
CLTCL1P53675 AC093388.1-201ENST00000609166 430 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 AC007786.3-201ENST00000615154 596 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CLTCL1P53675 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CLTCL1P53675 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CLTCL1P53675 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
CLTCL1P53675 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
CLTCL1P53675 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CLTCL1P53675 AL021877.2-201ENST00000624442 10684 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CLTCL1P53675 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
CLTCL1P53675 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CLTCL1P53675 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CLTCL1P53675 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CLTCL1P53675 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CLTCL1P53675 RN7SKP153-201ENST00000365026 316 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CLTCL1P53675 RSU1P3-201ENST00000412878 835 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 EIF2S2P3-201ENST00000428356 999 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 AC023271.1-201ENST00000445936 1090 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 AL672167.3-201ENST00000465951 960 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 RPL23AP72-201ENST00000492447 435 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 OR5AN2P-201ENST00000534535 896 ntBASIC7.3□□□□□ -1.24
CLTCL1P53675 AC019322.1-201ENST00000571869 389 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms