Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 MTCO1P55-201ENST00000489829 745 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 AGGF1P3-201ENST00000493675 1213 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DMAP28067 RNU6-943P-201ENST00000516960 98 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
HLA-DMAP28067 AP003396.4-201ENST00000527574 265 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 HMGN2P36-201ENST00000529541 409 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMAP28067 OR11H3P-201ENST00000554547 982 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 AC011270.1-201ENST00000558606 583 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 AL356801.1-201ENST00000559320 294 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DMAP28067 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DMAP28067 AC090236.2-201ENST00000587933 1101 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 AC108673.3-201ENST00000609183 335 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 AC244107.2-201ENST00000611773 76 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DMAP28067 AC135068.5-201ENST00000624197 983 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMAP28067 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DMAP28067 SCN1A-220ENST00000641603 12506 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DMAP28067 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DMAP28067 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMAP28067 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMAP28067 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DMAP28067 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DMAP28067 OR51H2P-202ENST00000641424 3046 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DMAP28067 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DMAP28067 LINC01963-201ENST00000562038 3148 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DMAP28067 RNA5SP500-201ENST00000364486 119 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DMAP28067 RN7SKP247-201ENST00000411094 308 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 AC124944.2-201ENST00000429866 1242 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 GAPDHP59-201ENST00000435908 267 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 RPL6P30-201ENST00000443382 862 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 AC073587.1-201ENST00000447093 876 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 AC097463.1-201ENST00000447288 481 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 AL122020.1-201ENST00000472287 459 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 AC020779.1-201ENST00000478757 796 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 RN7SKP35-201ENST00000517210 151 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 AC134698.5-201ENST00000519444 336 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 AC022882.1-201ENST00000532142 501 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 HMGN1P26-201ENST00000558737 303 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 AP005403.1-201ENST00000579720 229 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 AC090774.2-201ENST00000584708 322 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 AC063977.5-201ENST00000601044 974 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 AP000769.2-201ENST00000602344 396 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 MIR6823-201ENST00000622118 61 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 AC007603.3-201ENST00000636915 979 ntBASIC4.6□□□□□ -1.67
HLA-DMAP28067 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DMAP28067 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DMAP28067 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DMAP28067 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DMAP28067 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DMAP28067 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DMAP28067 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DMAP28067 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DMAP28067 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DMAP28067 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DMAP28067 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DMAP28067 HMGB3P7-201ENST00000400214 611 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 GCNT1P4-201ENST00000404096 329 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 AL133268.1-201ENST00000405676 1401 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DMAP28067 RNA5SP231-201ENST00000410496 138 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 RN7SKP38-201ENST00000410782 309 ntBASIC4.59□□□□□ -1.67
HLA-DMAP28067 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DMAP28067 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DMAP28067 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms