Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CTSDP07339 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTSDP07339 NEPNP-201ENST00000404786 1371 ntBASIC4.4□□□□□ -1.71
CTSDP07339 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CTSDP07339 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.39□□□□□ -1.71
CTSDP07339 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CTSDP07339 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 AL078599.1-201ENST00000402075 293 ntBASIC4.39□□□□□ -1.71
CTSDP07339 RN7SKP97-201ENST00000410966 333 ntBASIC4.39□□□□□ -1.71
CTSDP07339 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.39□□□□□ -1.71
CTSDP07339 OR2AH1P-201ENST00000425717 928 ntBASIC4.39□□□□□ -1.71
CTSDP07339 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.39□□□□□ -1.71
CTSDP07339 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.39□□□□□ -1.71
CTSDP07339 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.39□□□□□ -1.71
CTSDP07339 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.39□□□□□ -1.71
CTSDP07339 MRPL35P2-201ENST00000448009 511 ntBASIC4.39□□□□□ -1.71
CTSDP07339 BTF3P6-201ENST00000448054 499 ntBASIC4.39□□□□□ -1.71
CTSDP07339 NDUFA5P5-201ENST00000468361 342 ntBASIC4.39□□□□□ -1.71
CTSDP07339 SUMO2P4-201ENST00000504193 276 ntBASIC4.39□□□□□ -1.71
CTSDP07339 HMGB3P16-201ENST00000508037 287 ntBASIC4.39□□□□□ -1.71
CTSDP07339 RNU6-615P-201ENST00000516065 106 ntBASIC4.39□□□□□ -1.71
CTSDP07339 SNORA70.20-201ENST00000516848 126 ntBASIC4.39□□□□□ -1.71
CTSDP07339 SCARNA16.4-201ENST00000516956 187 ntBASIC4.39□□□□□ -1.71
CTSDP07339 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.39□□□□□ -1.71
CTSDP07339 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.39□□□□□ -1.71
CTSDP07339 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.39□□□□□ -1.71
CTSDP07339 RN7SL708P-201ENST00000580952 299 ntBASIC4.39□□□□□ -1.71
CTSDP07339 AL162431.4-201ENST00000604674 411 ntBASIC4.39□□□□□ -1.71
CTSDP07339 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.39□□□□□ -1.71
CTSDP07339 AL096712.1-201ENST00000614561 159 ntBASIC4.39□□□□□ -1.71
CTSDP07339 AC008691.1-209ENST00000642094 814 ntBASIC4.39□□□□□ -1.71
CTSDP07339 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
CTSDP07339 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.39□□□□□ -1.71
CTSDP07339 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 AC011447.7-201ENST00000624228 1590 ntBASIC4.39□□□□□ -1.71
CTSDP07339 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CTSDP07339 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
CTSDP07339 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTSDP07339 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CTSDP07339 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.38□□□□□ -1.71
CTSDP07339 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CTSDP07339 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
CTSDP07339 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.38□□□□□ -1.71
CTSDP07339 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CTSDP07339 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.38□□□□□ -1.71
CTSDP07339 TET1P1-201ENST00000426627 2301 ntBASIC4.38□□□□□ -1.71
CTSDP07339 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.38□□□□□ -1.71
CTSDP07339 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTSDP07339 AC023490.2-201ENST00000359859 470 ntBASIC4.38□□□□□ -1.71
CTSDP07339 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CTSDP07339 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CTSDP07339 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTSDP07339 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CTSDP07339 NAP1L4P2-201ENST00000425958 899 ntBASIC4.38□□□□□ -1.71
CTSDP07339 AC127526.2-201ENST00000426436 775 ntBASIC4.38□□□□□ -1.71
CTSDP07339 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.38□□□□□ -1.71
CTSDP07339 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.38□□□□□ -1.71
CTSDP07339 AL450996.1-201ENST00000445574 1202 ntBASIC4.38□□□□□ -1.71
CTSDP07339 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.38□□□□□ -1.71
CTSDP07339 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.38□□□□□ -1.71
CTSDP07339 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.38□□□□□ -1.71
CTSDP07339 AC090638.1-201ENST00000498296 909 ntBASIC4.38□□□□□ -1.71
CTSDP07339 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.38□□□□□ -1.71
CTSDP07339 HMGB1P44-201ENST00000508597 572 ntBASIC4.38□□□□□ -1.71
CTSDP07339 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.38□□□□□ -1.71
CTSDP07339 AL671862.1-201ENST00000515851 349 ntBASIC4.38□□□□□ -1.71
CTSDP07339 RNA5SP271-201ENST00000516700 88 ntBASIC4.38□□□□□ -1.71
CTSDP07339 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.38□□□□□ -1.71
CTSDP07339 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.38□□□□□ -1.71
CTSDP07339 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.38□□□□□ -1.71
CTSDP07339 IGBP1P1-201ENST00000554337 1009 ntBASIC4.38□□□□□ -1.71
CTSDP07339 MRPS21P7-201ENST00000566937 238 ntBASIC4.38□□□□□ -1.71
CTSDP07339 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.38□□□□□ -1.71
CTSDP07339 AC005726.4-201ENST00000582858 458 ntBASIC4.38□□□□□ -1.71
CTSDP07339 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.38□□□□□ -1.71
CTSDP07339 AC015802.2-201ENST00000589690 189 ntBASIC4.38□□□□□ -1.71
CTSDP07339 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTSDP07339 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTSDP07339 AC012616.1-201ENST00000600294 197 ntBASIC4.38□□□□□ -1.71
CTSDP07339 MIR6778-201ENST00000617912 73 ntBASIC4.38□□□□□ -1.71
CTSDP07339 AP001962.1-201ENST00000624114 559 ntBASIC4.38□□□□□ -1.71
CTSDP07339 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.38□□□□□ -1.71
CTSDP07339 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.38□□□□□ -1.71
CTSDP07339 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTSDP07339 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTSDP07339 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms