Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.04□□□□□ -1.12
HOXA2O43364 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC8.04□□□□□ -1.12
HOXA2O43364 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
HOXA2O43364 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC8.04□□□□□ -1.12
HOXA2O43364 HERC2P8-202ENST00000564334 3705 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 RNU6-254P-201ENST00000363377 107 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 RNA5SP429-201ENST00000363688 109 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 RNY3P3-201ENST00000363816 102 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC8.04□□□□□ -1.12
HOXA2O43364 SUGT1P1-201ENST00000379514 476 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 RNU6-809P-201ENST00000384461 107 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
HOXA2O43364 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
HOXA2O43364 RNU6-908P-201ENST00000410160 94 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 AL603650.1-201ENST00000412680 240 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 AC211486.3-201ENST00000412694 621 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 AL139128.1-201ENST00000413921 941 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 AC009413.1-201ENST00000414823 399 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 AC073335.1-201ENST00000427776 363 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 HMGB3P12-201ENST00000438745 556 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 RPS10P14-201ENST00000440748 502 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC8.04□□□□□ -1.12
HOXA2O43364 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.04□□□□□ -1.12
HOXA2O43364 RPL23AP20-201ENST00000447965 421 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC8.04□□□□□ -1.12
HOXA2O43364 CBX5P1-201ENST00000468470 561 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC8.04□□□□□ -1.12
HOXA2O43364 AC022730.1-201ENST00000473114 568 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 OR7E99P-201ENST00000505750 922 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 NPM1P21-201ENST00000513394 762 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 RPS20-202ENST00000518875 671 ntTSL 2 BASIC8.04□□□□□ -1.12
HOXA2O43364 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC8.04□□□□□ -1.12
HOXA2O43364 AC130366.1-201ENST00000526505 1192 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 BRD9P1-201ENST00000529855 560 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC8.04□□□□□ -1.12
HOXA2O43364 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC8.04□□□□□ -1.12
HOXA2O43364 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC8.04□□□□□ -1.12
HOXA2O43364 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC8.04□□□□□ -1.12
HOXA2O43364 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC8.04□□□□□ -1.12
HOXA2O43364 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC8.04□□□□□ -1.12
HOXA2O43364 BNIP3P23-201ENST00000599655 511 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC8.04□□□□□ -1.12
HOXA2O43364 AC090527.3-201ENST00000619041 548 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 TSHZ2-205ENST00000626626 670 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 ATP8A2P2-201ENST00000437678 1568 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 AC011592.1-201ENST00000624647 3634 ntBASIC8.04□□□□□ -1.12
HOXA2O43364 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
HOXA2O43364 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
HOXA2O43364 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 HDAC1P1-201ENST00000455482 1445 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
HOXA2O43364 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC8.03□□□□□ -1.12
HOXA2O43364 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HOXA2O43364 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC8.03□□□□□ -1.12
HOXA2O43364 RNU1-122P-201ENST00000365538 156 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
HOXA2O43364 PEX12P1-201ENST00000400284 1048 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 NPM1P38-201ENST00000403835 865 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 IL6-206ENST00000407492 926 ntTSL 3 BASIC8.03□□□□□ -1.12
HOXA2O43364 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC8.03□□□□□ -1.12
HOXA2O43364 AC114814.2-201ENST00000419195 485 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.03□□□□□ -1.12
HOXA2O43364 FTH1P5-201ENST00000425761 545 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 NANOGP6-201ENST00000429190 847 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.03□□□□□ -1.12
HOXA2O43364 PA2G4P1-201ENST00000442248 1197 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 SPRYD7P1-201ENST00000443861 570 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 WBP1LP1-201ENST00000460451 896 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 SNORA19.2-201ENST00000516013 114 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC8.03□□□□□ -1.12
HOXA2O43364 NXPE2P1-201ENST00000543705 726 ntBASIC8.03□□□□□ -1.12
HOXA2O43364 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC8.03□□□□□ -1.12
HOXA2O43364 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC8.03□□□□□ -1.12
HOXA2O43364 AC091932.1-201ENST00000569381 427 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms