Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 NDUFA5P11-201ENST00000567995 343 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 MIR4472-2-201ENST00000582069 67 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 AC005726.4-201ENST00000582858 458 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 AC118658.2-201ENST00000618697 459 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 AL359742.1-201ENST00000622497 540 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 AC015689.2-201ENST00000528172 1738 ntBASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 RNU1-146P-201ENST00000364015 165 ntBASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 RNA5SP122-201ENST00000384457 108 ntBASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AC009238.2-201ENST00000431026 355 ntBASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AC144530.1-201ENST00000452862 555 ntBASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 NDUFA5P5-201ENST00000468361 342 ntBASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AC105031.1-201ENST00000518550 476 ntBASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 BLZF2P-201ENST00000553776 1130 ntBASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 HMGN2P47-201ENST00000559378 272 ntBASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AC093591.2-201ENST00000565254 3843 ntBASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 OOSP1P2-201ENST00000579644 351 ntBASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 BNIP3P35-201ENST00000604530 490 ntBASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AP000550.3-201ENST00000637734 379 ntBASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AL022393.1-201ENST00000625142 1677 ntBASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 AL442128.2-201ENST00000620246 1824 ntBASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM49D1C9J1S8 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 AC008079.2-201ENST00000623543 20396 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 RPL10P10-201ENST00000403509 664 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 NPM1P40-201ENST00000412758 733 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 VN1R3-201ENST00000418822 919 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 OR5M12P-201ENST00000423388 929 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 NAP1L4P2-201ENST00000425958 899 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 KCTD9P1-201ENST00000430462 1167 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 RPL35AP21-201ENST00000437667 333 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 AC002504.1-201ENST00000438281 691 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 RPL7P40-201ENST00000481703 745 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 AC090638.1-201ENST00000498296 909 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 RNA5SP373-201ENST00000517271 95 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 FTH1P11-201ENST00000517577 551 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 NANOGNBP2-201ENST00000544753 553 ntBASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM49D1C9J1S8 MIR6861-201ENST00000618657 64 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms