Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 RNF138P2-201ENST00000603490 592 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AC073333.2-201ENST00000603589 769 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AC109583.2-201ENST00000617367 129 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AL512652.1-201ENST00000619006 500 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AP003400.2-201ENST00000624036 666 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 TMEM30CP-203ENST00000637814 1035 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AL034370.1-201ENST00000397254 1590 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AC139713.2-215ENST00000641428 5037 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 MIPEPP2-201ENST00000422560 1819 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AC107021.2-201ENST00000567714 2095 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 NEPNP-201ENST00000404786 1371 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 VN1R12P-201ENST00000403778 876 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 RN7SKP86-201ENST00000410454 332 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 RPL24P2-201ENST00000421023 475 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AC106901.1-201ENST00000425086 698 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AC093166.3-201ENST00000448785 303 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AC093166.4-201ENST00000457867 318 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AP000942.1-201ENST00000463969 747 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 TCP11X3P-202ENST00000514289 1254 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 RNA5SP249-201ENST00000516127 99 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 RNA5SP441-201ENST00000516809 88 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AC021678.3-201ENST00000517893 476 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AP000769.2-201ENST00000602344 396 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AC018695.5-201ENST00000605872 315 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 SNORD91B-202ENST00000608459 222 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AC097505.1-201ENST00000610199 565 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 uc_338.29-201ENST00000615099 168 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AP005431.1-201ENST00000618479 319 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AL158062.1-201ENST00000619632 745 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AC006840.1-201ENST00000623069 542 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AP003400.3-201ENST00000624904 346 ntBASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RBFOX3A6NFN3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 BTBD10P1-201ENST00000549824 1352 ntBASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 AL159987.1-201ENST00000347911 293 ntBASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 RN7SKP187-201ENST00000365536 330 ntBASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 RNU6-1320P-201ENST00000390838 107 ntBASIC4.19□□□□□ -1.74
RBFOX3A6NFN3 RNU6-1269P-201ENST00000391139 107 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms