Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AC007159.1-201ENST00000566529 4706 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 RNU4-92P-201ENST00000363783 136 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 RNA5SP435-201ENST00000364044 108 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AL050335.1-201ENST00000396909 869 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 FCF1P5-201ENST00000406490 482 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AL023284.3-201ENST00000407767 334 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 RNU4-22P-201ENST00000411058 166 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AC010099.3-201ENST00000423896 409 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 SETP8-201ENST00000435341 628 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 PNKDP1-201ENST00000435914 430 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AMYP1-201ENST00000440059 1023 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 EEF1A1P39-201ENST00000440791 250 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AL645936.1-201ENST00000441979 518 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AC097463.1-201ENST00000447288 481 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 RPL31P44-201ENST00000447680 377 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 CDC42P1-201ENST00000456658 548 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 RPL7P48-201ENST00000461513 746 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 RN7SL221P-201ENST00000466190 281 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 RN7SL643P-201ENST00000471845 291 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AC096741.1-201ENST00000472250 846 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 LSM3P4-201ENST00000502948 309 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AC119751.5-201ENST00000514077 770 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AP001636.2-201ENST00000525517 696 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AC122134.1-201ENST00000565664 1104 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 MIR4701-201ENST00000583094 63 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 GAS5-AS1-201ENST00000602767 694 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AL138895.2-201ENST00000603019 178 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AC108865.2-201ENST00000606881 432 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AC079416.3-201ENST00000624479 549 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AC073488.6-201ENST00000632293 754 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 AL137100.1-201ENST00000556703 1620 ntBASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCDHGA6Q9Y5G7 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA6Q9Y5G7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms