Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AL672167.3-201ENST00000465951 960 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 CYCSP20-201ENST00000473154 315 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 RPS14P8-201ENST00000478778 369 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 RPL23AP8-201ENST00000479812 475 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 RN7SL797P-201ENST00000486314 297 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 APOBEC3AP1-201ENST00000511396 287 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 NAP1L1P1-201ENST00000524793 1063 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AP000916.1-201ENST00000533869 835 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AL121821.2-201ENST00000556081 394 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AC087477.6-201ENST00000559595 843 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AC015688.2-201ENST00000584523 262 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AL355598.1-201ENST00000604169 202 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AL160413.1-201ENST00000622780 310 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AC073593.1-201ENST00000624500 411 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AC068213.1-201ENST00000625124 226 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 FAM157B-203ENST00000639350 358 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AC091544.5-201ENST00000620192 3815 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 ZNF969P-201ENST00000510345 2341 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 CR383656.5-201ENST00000547616 1340 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 LPAL2-203ENST00000454031 2498 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 SNORA63C-201ENST00000364578 129 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 MIR640-201ENST00000385086 96 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 AL359715.1-201ENST00000404330 555 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 RN7SKP279-201ENST00000411383 298 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 AC007390.1-201ENST00000415722 356 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 AC245291.3-201ENST00000443400 292 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 USP9YP12-201ENST00000450481 570 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 DNAJC19P1-201ENST00000455312 319 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 AC010878.1-201ENST00000456500 1047 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 SNORA81.1-201ENST00000458922 177 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 AC135721.2-201ENST00000464237 300 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 AC096743.1-201ENST00000485172 319 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 AC015524.1-201ENST00000491585 472 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 RPL37P23-201ENST00000492641 294 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 BTF3P13-201ENST00000513224 490 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 AC096708.2-201ENST00000577676 512 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 AC022662.1-201ENST00000580252 331 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 MIR6778-201ENST00000617912 73 ntBASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 EED-206ENST00000527888 1422 ntTSL 2 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC8.85□□□□□ -0.99
PDZRN3Q9UPQ7 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 Y_RNA.450-201ENST00000384198 113 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms