Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 AC068287.1-201ENST00000430283 295 ntBASIC7.92□□□□□ -1.14
SCAPERQ9BY12 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 RPL7P11-201ENST00000437586 658 ntBASIC7.92□□□□□ -1.14
SCAPERQ9BY12 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 AC234781.3-201ENST00000452540 973 ntBASIC7.92□□□□□ -1.14
SCAPERQ9BY12 RPS23P7-201ENST00000466210 444 ntBASIC7.92□□□□□ -1.14
SCAPERQ9BY12 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 RNA5SP43-201ENST00000516559 110 ntBASIC7.92□□□□□ -1.14
SCAPERQ9BY12 IGKV1-32-201ENST00000519290 311 ntBASIC7.92□□□□□ -1.14
SCAPERQ9BY12 ARL6IP1P3-201ENST00000524544 560 ntBASIC7.92□□□□□ -1.14
SCAPERQ9BY12 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 SS18L2P2-201ENST00000583960 235 ntBASIC7.92□□□□□ -1.14
SCAPERQ9BY12 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 AC008814.1-201ENST00000603797 406 ntBASIC7.92□□□□□ -1.14
SCAPERQ9BY12 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SCAPERQ9BY12 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
SCAPERQ9BY12 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
SCAPERQ9BY12 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.91□□□□□ -1.14
SCAPERQ9BY12 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
SCAPERQ9BY12 RNA5SP332-201ENST00000391063 115 ntBASIC7.91□□□□□ -1.14
SCAPERQ9BY12 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SCAPERQ9BY12 RN7SKP114-201ENST00000410327 279 ntBASIC7.91□□□□□ -1.14
SCAPERQ9BY12 RNA5SP113-201ENST00000410486 84 ntBASIC7.91□□□□□ -1.14
SCAPERQ9BY12 AC069213.2-201ENST00000420238 366 ntBASIC7.91□□□□□ -1.14
SCAPERQ9BY12 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC7.91□□□□□ -1.14
SCAPERQ9BY12 OR52J1P-201ENST00000450596 932 ntBASIC7.91□□□□□ -1.14
SCAPERQ9BY12 AC079168.1-201ENST00000458741 345 ntBASIC7.91□□□□□ -1.14
SCAPERQ9BY12 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SCAPERQ9BY12 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.91□□□□□ -1.14
SCAPERQ9BY12 NPM1P42-201ENST00000560329 862 ntBASIC7.91□□□□□ -1.14
SCAPERQ9BY12 MIR4420-201ENST00000583944 77 ntBASIC7.91□□□□□ -1.14
SCAPERQ9BY12 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.91□□□□□ -1.14
SCAPERQ9BY12 AL391358.1-201ENST00000605342 190 ntBASIC7.91□□□□□ -1.14
SCAPERQ9BY12 AC068831.8-201ENST00000620171 435 ntBASIC7.91□□□□□ -1.14
SCAPERQ9BY12 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC7.91□□□□□ -1.14
SCAPERQ9BY12 AC135068.12-201ENST00000637370 931 ntBASIC7.91□□□□□ -1.14
SCAPERQ9BY12 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SCAPERQ9BY12 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
SCAPERQ9BY12 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SCAPERQ9BY12 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 SNORD56.6-201ENST00000384569 71 ntBASIC7.9□□□□□ -1.14
SCAPERQ9BY12 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 SNORD125-201ENST00000459538 96 ntBASIC7.9□□□□□ -1.14
SCAPERQ9BY12 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 AC233699.1-201ENST00000569955 1168 ntBASIC7.9□□□□□ -1.14
SCAPERQ9BY12 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
SCAPERQ9BY12 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
SCAPERQ9BY12 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.9□□□□□ -1.15
SCAPERQ9BY12 AC007159.1-201ENST00000566529 4706 ntBASIC7.9□□□□□ -1.15
SCAPERQ9BY12 AC140479.2-201ENST00000421567 3130 ntBASIC7.9□□□□□ -1.15
SCAPERQ9BY12 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.9□□□□□ -1.15
SCAPERQ9BY12 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.9□□□□□ -1.15
SCAPERQ9BY12 UGT2B24P-201ENST00000514441 1597 ntBASIC7.89□□□□□ -1.15
SCAPERQ9BY12 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 RNA5SP90-201ENST00000364801 99 ntBASIC7.89□□□□□ -1.15
SCAPERQ9BY12 GNG5P2-201ENST00000372054 207 ntBASIC7.89□□□□□ -1.15
SCAPERQ9BY12 AC004074.1-201ENST00000421810 1063 ntBASIC7.89□□□□□ -1.15
SCAPERQ9BY12 OR10T1P-201ENST00000424327 947 ntBASIC7.89□□□□□ -1.15
SCAPERQ9BY12 AC092651.1-201ENST00000426110 312 ntBASIC7.89□□□□□ -1.15
SCAPERQ9BY12 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 AL161747.1-201ENST00000480068 358 ntBASIC7.89□□□□□ -1.15
SCAPERQ9BY12 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC7.89□□□□□ -1.15
SCAPERQ9BY12 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms