Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 MTND2P7-201ENST00000521337 640 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC121758.1-202ENST00000556917 658 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC092332.1-201ENST00000563684 829 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC127024.5-201ENST00000580085 462 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC145423.1-201ENST00000605712 336 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 AL354696.1-201ENST00000614652 497 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 AC003001.2-201ENST00000616294 831 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 HTR1DP1-201ENST00000616500 888 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFT1Q96AA3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFT1Q96AA3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFT1Q96AA3 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.96□□□□□ -1.62
RFT1Q96AA3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
RFT1Q96AA3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFT1Q96AA3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFT1Q96AA3 ADAM5-202ENST00000399789 1942 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 RLIMP2-201ENST00000427891 1563 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RFT1Q96AA3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFT1Q96AA3 OR4F13P-202ENST00000560066 2054 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC079097.1-201ENST00000512187 1399 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 AL121886.1-201ENST00000358609 435 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 AL606490.7-201ENST00000433136 191 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 RPL5P7-201ENST00000444235 813 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 OR7E116P-201ENST00000448529 957 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC092865.4-201ENST00000477936 615 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 DUTP1-201ENST00000493631 470 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 IGLV3-30-201ENST00000524362 298 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 SNRPGP1-201ENST00000553864 222 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 MIMT1-201ENST00000597105 1050 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 AP004372.1-201ENST00000604842 844 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC004241.3-201ENST00000611728 517 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC074276.2-201ENST00000619891 348 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC105105.5-201ENST00000622635 1294 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 LINC00216-201ENST00000623548 1126 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 SAMMSON-227ENST00000642114 1199 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RFT1Q96AA3 SMG1P4-204ENST00000523028 4131 ntBASIC4.95□□□□□ -1.62
RFT1Q96AA3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFT1Q96AA3 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFT1Q96AA3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFT1Q96AA3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFT1Q96AA3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.95□□□□□ -1.62
RFT1Q96AA3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
RFT1Q96AA3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFT1Q96AA3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 AC093775.1-201ENST00000624154 1868 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFT1Q96AA3 HSPD1P9-201ENST00000420325 1636 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
RFT1Q96AA3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFT1Q96AA3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFT1Q96AA3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFT1Q96AA3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms