Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 Y_RNA.72-201ENST00000362894 103 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 RNA5SP396-201ENST00000364834 120 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 SNORD81.2-201ENST00000365153 76 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 RNA5SP355-201ENST00000365317 135 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 RNA5SP238-201ENST00000365464 120 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 ARMCX7P-201ENST00000372828 562 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 RNU6-767P-201ENST00000384132 107 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 YWHAZP6-201ENST00000399764 738 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 SNORA3.1-201ENST00000408166 111 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 RN7SKP236-201ENST00000410635 284 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 SNX18P13-201ENST00000412442 529 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 RPL26P29-201ENST00000415623 438 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 RPS26P13-201ENST00000419030 330 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AL157884.1-201ENST00000424561 454 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AC009303.1-201ENST00000426307 352 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 SEPT7P5-201ENST00000434048 306 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 SDCBPP1-201ENST00000440192 890 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 IPO7P1-201ENST00000442031 636 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AL157827.1-201ENST00000447622 132 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 BX842559.2-201ENST00000451418 605 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 RPL38P1-201ENST00000460914 211 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 RN7SL791P-201ENST00000467868 295 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AC008629.2-201ENST00000503783 483 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 HMGB1P29-201ENST00000505659 499 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 OR5F2P-201ENST00000532761 941 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AC087257.2-201ENST00000538759 928 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AC011611.6-201ENST00000547483 255 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AC020661.2-201ENST00000560114 134 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 FRG2IP-201ENST00000563581 781 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 RBM22P12-201ENST00000567098 1255 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 RN7SL697P-201ENST00000582484 299 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AC093635.1-201ENST00000609028 555 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AP001506.1-201ENST00000615444 211 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 BX005040.2-201ENST00000620504 370 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 AC011008.2-201ENST00000624866 3352 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 SALL4P7-201ENST00000555779 3120 ntBASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LYSMD3Q7Z3D4 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 AL589993.1-201ENST00000407450 2524 ntBASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 AC010132.2-201ENST00000295493 1043 ntBASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 RNU6-1122P-201ENST00000384449 107 ntBASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 MT-TR-201ENST00000387439 65 ntBASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 AC104297.1-201ENST00000393779 870 ntBASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 SNRPEP2-201ENST00000397592 279 ntBASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 RPS3AP36-201ENST00000398190 775 ntBASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 AL356432.1-201ENST00000405809 419 ntBASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 AL512422.1-201ENST00000407033 553 ntBASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 RPL12P10-201ENST00000413498 498 ntBASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 PPIAP30-201ENST00000415473 519 ntBASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 PDCL2P1-201ENST00000419302 352 ntBASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 AL593856.1-201ENST00000419949 805 ntBASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.38□□□□□ -1.23
LYSMD3Q7Z3D4 AL356583.2-201ENST00000426536 280 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms