Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 TCP11X1-202ENST00000622971 1372 ntBASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 RNA5SP183-201ENST00000362452 119 ntBASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 RNA5SP339-201ENST00000390987 122 ntBASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 AP000534.2-201ENST00000412729 568 ntBASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 AC109464.1-201ENST00000511091 819 ntBASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 NPM1P45-201ENST00000583151 559 ntBASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 AC010487.1-201ENST00000594408 1172 ntBASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 AL512329.2-201ENST00000607350 548 ntBASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 AC008115.4-201ENST00000619780 775 ntBASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 ADAM5-202ENST00000399789 1942 ntBASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 PABPC1P6-201ENST00000445594 1829 ntBASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.6□□□□□ -1.51
RFWD3Q6PCD5 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 LINC02210-201ENST00000444561 288 ntBASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 RPL7P39-201ENST00000481157 744 ntBASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 HMGB1P44-201ENST00000508597 572 ntBASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 RNU6-941P-201ENST00000516346 108 ntBASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 RNA5SP92-201ENST00000516437 110 ntBASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 IGLV2-28-201ENST00000520681 304 ntBASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 HMGB1P40-201ENST00000525121 540 ntBASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 AL049779.2-201ENST00000553847 315 ntBASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 RPL10P14-201ENST00000565265 298 ntBASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 SDR42E1P1-201ENST00000611327 477 ntBASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 AC073869.8-201ENST00000641806 335 ntBASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFWD3Q6PCD5 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
RFWD3Q6PCD5 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
RFWD3Q6PCD5 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RFWD3Q6PCD5 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
RFWD3Q6PCD5 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.59□□□□□ -1.52
RFWD3Q6PCD5 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 AC125336.1-201ENST00000508893 2827 ntBASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 C4BPAP1-201ENST00000415474 1893 ntBASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 U3.7-201ENST00000363668 216 ntBASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 AL691447.1-201ENST00000419456 387 ntBASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 NANOGP4-201ENST00000427230 913 ntBASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 FAM96AP1-201ENST00000430879 482 ntBASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 AC245047.2-201ENST00000441060 530 ntBASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 AL672138.1-201ENST00000450604 1015 ntBASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 CBX1P2-201ENST00000453841 458 ntBASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 RN7SL188P-201ENST00000469842 285 ntBASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 RN7SL799P-201ENST00000475891 298 ntBASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 RN7SL30P-201ENST00000488416 306 ntBASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 RN7SL447P-201ENST00000494711 245 ntBASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 AC008953.1-201ENST00000497334 318 ntBASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.58□□□□□ -1.52
RFWD3Q6PCD5 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms