Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 BCORP1-203ENST00000513194 5093 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 RN7SKP124-201ENST00000364730 341 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 MIR421-201ENST00000365696 85 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 MIR130A-201ENST00000385274 89 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 OR3A2-201ENST00000408891 1076 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 RN7SKP229-201ENST00000410465 302 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 OR6E1P-201ENST00000414424 923 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 TNPO1P1-201ENST00000423641 1138 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 CRIP1P1-201ENST00000427567 185 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 HMGB3P10-201ENST00000434734 572 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 FMO7P-201ENST00000436045 768 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AL450023.1-201ENST00000450868 751 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 RPS23P2-201ENST00000463671 415 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 FABP5P6-201ENST00000510588 409 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 ATP5LP3-201ENST00000514223 304 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AC020937.1-201ENST00000519677 1013 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 HSPE1P2-201ENST00000554777 306 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AC010487.1-201ENST00000594408 1172 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AP004372.1-201ENST00000604842 844 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AL390318.1-201ENST00000624564 687 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 AP004607.3-201ENST00000530354 3915 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 CIR1P2-201ENST00000514821 1342 ntBASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX30Q5VWJ9 HSPD1P7-201ENST00000447985 1686 ntBASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 AC114786.1-201ENST00000512892 1415 ntBASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 RNU6-729P-201ENST00000384399 107 ntBASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 RN7SKP279-201ENST00000411383 298 ntBASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 AC242426.1-201ENST00000435270 960 ntBASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 ARAFP2-201ENST00000440565 559 ntBASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 Z99127.2-201ENST00000441426 334 ntBASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 RSU1P1-201ENST00000453416 441 ntBASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 AC090543.1-201ENST00000492168 485 ntBASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 COL6A4P2-205ENST00000509855 506 ntBASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 RNA5SP362-201ENST00000516048 118 ntBASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 AC067904.2-201ENST00000517322 1283 ntBASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 AC060780.2-201ENST00000589047 198 ntBASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX30Q5VWJ9 BMS1P7-201ENST00000602440 1052 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms