Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN12P56749 AC239798.3-201ENST00000454459 408 ntBASIC4.58□□□□□ -1.68
CLDN12P56749 CEACAMP11-201ENST00000455211 583 ntBASIC4.58□□□□□ -1.68
CLDN12P56749 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN12P56749 CBX1P5-201ENST00000475330 559 ntBASIC4.58□□□□□ -1.68
CLDN12P56749 AC058823.1-201ENST00000485315 474 ntBASIC4.58□□□□□ -1.68
CLDN12P56749 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN12P56749 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN12P56749 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN12P56749 RFPL4AP3-201ENST00000515267 345 ntBASIC4.58□□□□□ -1.68
CLDN12P56749 RNU6-615P-201ENST00000516065 106 ntBASIC4.58□□□□□ -1.68
CLDN12P56749 AC022360.1-201ENST00000521058 340 ntBASIC4.58□□□□□ -1.68
CLDN12P56749 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.58□□□□□ -1.68
CLDN12P56749 AC027369.2-201ENST00000528030 440 ntBASIC4.58□□□□□ -1.68
CLDN12P56749 AL845552.1-201ENST00000556820 323 ntBASIC4.58□□□□□ -1.68
CLDN12P56749 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN12P56749 MIR3154-201ENST00000577829 84 ntBASIC4.58□□□□□ -1.68
CLDN12P56749 AC233702.9-201ENST00000581528 203 ntBASIC4.58□□□□□ -1.68
CLDN12P56749 PPATP2-201ENST00000605635 508 ntBASIC4.58□□□□□ -1.68
CLDN12P56749 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN12P56749 AC008691.1-209ENST00000642094 814 ntBASIC4.58□□□□□ -1.68
CLDN12P56749 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN12P56749 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN12P56749 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CLDN12P56749 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CLDN12P56749 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN12P56749 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN12P56749 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN12P56749 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN12P56749 AC023421.1-201ENST00000590535 1785 ntBASIC4.58□□□□□ -1.68
CLDN12P56749 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CLDN12P56749 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN12P56749 AL022393.1-201ENST00000625142 1677 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN12P56749 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN12P56749 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN12P56749 AP001642.1-201ENST00000624727 2117 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CLDN12P56749 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN12P56749 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN12P56749 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CLDN12P56749 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CLDN12P56749 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN12P56749 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CLDN12P56749 RNU1-65P-201ENST00000363919 148 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 RNA5SP394-201ENST00000364216 119 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 RNA5SP223-201ENST00000365174 120 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CLDN12P56749 OR7E101P-201ENST00000400428 513 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 AC245060.4-201ENST00000413293 1121 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN12P56749 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN12P56749 SETP10-201ENST00000424368 814 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 NANOGP4-201ENST00000427230 913 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN12P56749 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.57□□□□□ -1.68
CLDN12P56749 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN12P56749 ACA64.1-201ENST00000459171 127 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN12P56749 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN12P56749 AC104339.1-201ENST00000465478 348 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN12P56749 OR9N1P-201ENST00000491296 333 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 OR2A3P-201ENST00000493774 953 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 RN7SL591P-201ENST00000496150 292 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 LSM3P4-201ENST00000502948 309 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.57□□□□□ -1.68
CLDN12P56749 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN12P56749 AC025458.1-201ENST00000506046 166 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN12P56749 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN12P56749 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN12P56749 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN12P56749 AC007066.2-202ENST00000566531 914 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 AC092121.1-201ENST00000569452 202 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN12P56749 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN12P56749 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN12P56749 AC093775.1-201ENST00000624154 1868 ntBASIC4.57□□□□□ -1.68
CLDN12P56749 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN12P56749 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN12P56749 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CLDN12P56749 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CLDN12P56749 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN12P56749 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.57□□□□□ -1.68
CLDN12P56749 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN12P56749 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN12P56749 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN12P56749 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN12P56749 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN12P56749 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN12P56749 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 STX3-208ENST00000641815 3236 ntBASIC4.56□□□□□ -1.68
CLDN12P56749 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN12P56749 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN12P56749 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 759.7 ms