Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPN5P54829 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPN5P54829 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTPN5P54829 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTPN5P54829 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTPN5P54829 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPN5P54829 R3HDM2P1-201ENST00000505381 1960 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8.19□□□□□ -1.1
PTPN5P54829 AL049776.1-201ENST00000624600 2025 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPN5P54829 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTPN5P54829 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPN5P54829 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
PTPN5P54829 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
PTPN5P54829 RNA5SP463-201ENST00000363030 120 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 RN7SKP211-201ENST00000363328 315 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 SSX6-201ENST00000376932 562 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC8.19□□□□□ -1.1
PTPN5P54829 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPN5P54829 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
PTPN5P54829 AC008155.1-201ENST00000421078 329 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 FAM183DP-201ENST00000421987 399 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 VDAC1P2-201ENST00000423609 850 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPN5P54829 USP24P1-201ENST00000433802 779 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 ZDHHC20P1-204ENST00000435787 423 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 AL604028.2-201ENST00000437848 788 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 RPL12P11-201ENST00000439970 501 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC8.19□□□□□ -1.1
PTPN5P54829 DNAJB5P1-201ENST00000454004 806 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 AC091564.1-201ENST00000464563 479 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 RPS4XP17-201ENST00000479057 754 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 AC113208.1-201ENST00000497944 318 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPN5P54829 RNA5SP401-201ENST00000515920 127 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 SNORA31.13-201ENST00000516624 135 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPN5P54829 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPN5P54829 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPN5P54829 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPN5P54829 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC8.19□□□□□ -1.1
PTPN5P54829 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC8.19□□□□□ -1.1
PTPN5P54829 AC010525.2-201ENST00000590920 195 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC8.19□□□□□ -1.1
PTPN5P54829 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPN5P54829 AL953862.2-201ENST00000603089 820 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 AL359704.2-201ENST00000604335 521 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPN5P54829 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPN5P54829 AC093909.6-201ENST00000624757 775 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 AC135068.11-201ENST00000636378 921 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
PTPN5P54829 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTPN5P54829 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPN5P54829 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTPN5P54829 ACTBP13-201ENST00000423971 3959 ntBASIC8.19□□□□□ -1.1
PTPN5P54829 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
PTPN5P54829 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPN5P54829 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPN5P54829 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC8.19□□□□□ -1.1
PTPN5P54829 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPN5P54829 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPN5P54829 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.18□□□□□ -1.1
PTPN5P54829 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTPN5P54829 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC8.18□□□□□ -1.1
PTPN5P54829 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
PTPN5P54829 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTPN5P54829 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC8.18□□□□□ -1.1
PTPN5P54829 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTPN5P54829 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTPN5P54829 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC8.18□□□□□ -1.1
PTPN5P54829 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PTPN5P54829 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTPN5P54829 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
PTPN5P54829 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTPN5P54829 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
PTPN5P54829 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTPN5P54829 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
PTPN5P54829 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
PTPN5P54829 Y_RNA.180-201ENST00000363867 113 ntBASIC8.18□□□□□ -1.1
PTPN5P54829 RNU6-282P-201ENST00000365357 103 ntBASIC8.18□□□□□ -1.1
PTPN5P54829 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
PTPN5P54829 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC8.18□□□□□ -1.1
PTPN5P54829 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PTPN5P54829 RPS4XP8-201ENST00000402039 771 ntBASIC8.18□□□□□ -1.1
PTPN5P54829 HMGB1P11-201ENST00000413899 637 ntBASIC8.18□□□□□ -1.1
PTPN5P54829 RPL7P57-201ENST00000423238 740 ntBASIC8.18□□□□□ -1.1
PTPN5P54829 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.18□□□□□ -1.1
PTPN5P54829 DNAJC19P7-201ENST00000428811 344 ntBASIC8.18□□□□□ -1.1
PTPN5P54829 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC8.18□□□□□ -1.1
PTPN5P54829 AL035666.1-201ENST00000446195 348 ntBASIC8.18□□□□□ -1.1
PTPN5P54829 AC239798.1-201ENST00000449024 1176 ntBASIC8.18□□□□□ -1.1
PTPN5P54829 SUMO2P10-201ENST00000452006 288 ntBASIC8.18□□□□□ -1.1
PTPN5P54829 RPS20P4-201ENST00000461659 355 ntBASIC8.18□□□□□ -1.1
PTPN5P54829 AC004801.2-201ENST00000468202 779 ntBASIC8.18□□□□□ -1.1
PTPN5P54829 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC8.18□□□□□ -1.1
PTPN5P54829 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PTPN5P54829 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC8.18□□□□□ -1.1
PTPN5P54829 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.18□□□□□ -1.1
PTPN5P54829 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms