Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
BRCA2P51587 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
BRCA2P51587 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC5.49□□□□□ -1.53
BRCA2P51587 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
BRCA2P51587 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
BRCA2P51587 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
BRCA2P51587 AL121977.1-201ENST00000401636 979 ntBASIC5.49□□□□□ -1.53
BRCA2P51587 FABP7P1-201ENST00000424004 391 ntBASIC5.49□□□□□ -1.53
BRCA2P51587 RN7SL814P-201ENST00000487715 300 ntBASIC5.49□□□□□ -1.53
BRCA2P51587 AC104971.1-201ENST00000495117 578 ntBASIC5.49□□□□□ -1.53
BRCA2P51587 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
BRCA2P51587 SLITRK1-201ENST00000377084 5189 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
BRCA2P51587 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.49□□□□□ -1.53
BRCA2P51587 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
BRCA2P51587 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC5.49□□□□□ -1.53
BRCA2P51587 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.49□□□□□ -1.53
BRCA2P51587 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC5.49□□□□□ -1.53
BRCA2P51587 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 GIGYF2-202ENST00000409196 5747 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.48□□□□□ -1.53
BRCA2P51587 AC016745.2-201ENST00000608834 3443 ntBASIC5.48□□□□□ -1.53
BRCA2P51587 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 AL691482.1-201ENST00000453255 87 ntBASIC5.48□□□□□ -1.53
BRCA2P51587 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.48□□□□□ -1.53
BRCA2P51587 AC039056.2-201ENST00000622261 511 ntBASIC5.48□□□□□ -1.53
BRCA2P51587 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.48□□□□□ -1.53
BRCA2P51587 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.48□□□□□ -1.53
BRCA2P51587 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
BRCA2P51587 REG1CP-206ENST00000447469 496 ntBASIC5.48□□□□□ -1.53
BRCA2P51587 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.48□□□□□ -1.53
BRCA2P51587 TAF8-201ENST00000372977 6680 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC5.48□□□□□ -1.53
BRCA2P51587 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.48□□□□□ -1.53
BRCA2P51587 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 ATP5HP3-201ENST00000396994 486 ntBASIC5.48□□□□□ -1.53
BRCA2P51587 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.48□□□□□ -1.53
BRCA2P51587 RNF10P1-201ENST00000418589 369 ntBASIC5.48□□□□□ -1.53
BRCA2P51587 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.48□□□□□ -1.53
BRCA2P51587 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.48□□□□□ -1.53
BRCA2P51587 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.48□□□□□ -1.53
BRCA2P51587 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.48□□□□□ -1.53
BRCA2P51587 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.48□□□□□ -1.53
BRCA2P51587 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.48□□□□□ -1.53
BRCA2P51587 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRCA2P51587 ECM1P2-201ENST00000503354 1577 ntBASIC5.48□□□□□ -1.53
BRCA2P51587 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
BRCA2P51587 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC5.47□□□□□ -1.53
BRCA2P51587 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRCA2P51587 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRCA2P51587 AC017104.4-201ENST00000636283 1592 ntBASIC5.47□□□□□ -1.53
BRCA2P51587 AC007114.2-201ENST00000576014 4281 ntBASIC5.47□□□□□ -1.53
BRCA2P51587 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
BRCA2P51587 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
BRCA2P51587 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.47□□□□□ -1.53
BRCA2P51587 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
BRCA2P51587 ARF4P1-201ENST00000605447 541 ntBASIC5.47□□□□□ -1.53
BRCA2P51587 AC005225.5-201ENST00000623547 2225 ntBASIC5.47□□□□□ -1.53
BRCA2P51587 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
BRCA2P51587 UGT2B26P-201ENST00000508672 1613 ntBASIC5.47□□□□□ -1.53
BRCA2P51587 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRCA2P51587 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRCA2P51587 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC5.47□□□□□ -1.53
BRCA2P51587 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRCA2P51587 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRCA2P51587 HSPD1P8-201ENST00000400121 1658 ntBASIC5.47□□□□□ -1.53
BRCA2P51587 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRCA2P51587 TMBIM7P-201ENST00000418074 855 ntBASIC5.47□□□□□ -1.53
BRCA2P51587 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.47□□□□□ -1.53
BRCA2P51587 NUTF2P3-201ENST00000448540 384 ntBASIC5.47□□□□□ -1.53
BRCA2P51587 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.47□□□□□ -1.53
BRCA2P51587 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.47□□□□□ -1.53
BRCA2P51587 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.47□□□□□ -1.53
BRCA2P51587 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
BRCA2P51587 AC009027.1-201ENST00000604510 479 ntBASIC5.47□□□□□ -1.53
BRCA2P51587 MIR6853-201ENST00000619642 74 ntBASIC5.47□□□□□ -1.53
BRCA2P51587 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
BRCA2P51587 AC004777.1-201ENST00000624317 287 ntBASIC5.47□□□□□ -1.53
BRCA2P51587 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRCA2P51587 BRD7P6-201ENST00000431406 1860 ntBASIC5.47□□□□□ -1.53
BRCA2P51587 MAPK10-338ENST00000641647 3362 ntBASIC5.47□□□□□ -1.53
BRCA2P51587 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRCA2P51587 TEX14-202ENST00000349033 4773 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
BRCA2P51587 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRCA2P51587 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.47□□□□□ -1.53
BRCA2P51587 AL442639.1-201ENST00000625030 1899 ntBASIC5.47□□□□□ -1.53
BRCA2P51587 AC114755.2-201ENST00000413520 361 ntBASIC5.46□□□□□ -1.53
BRCA2P51587 AC108463.1-201ENST00000450258 347 ntBASIC5.46□□□□□ -1.53
BRCA2P51587 HMGB1P4-201ENST00000455362 567 ntBASIC5.46□□□□□ -1.53
BRCA2P51587 RPS12P31-201ENST00000491419 398 ntBASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms