Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SMARCA4P51532 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC9.11□□□□□ -0.95
SMARCA4P51532 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SMARCA4P51532 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SMARCA4P51532 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC9.11□□□□□ -0.95
SMARCA4P51532 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SMARCA4P51532 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC9.11□□□□□ -0.95
SMARCA4P51532 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SMARCA4P51532 AL137100.1-201ENST00000556703 1620 ntBASIC9.11□□□□□ -0.95
SMARCA4P51532 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC9.1□□□□□ -0.95
SMARCA4P51532 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
SMARCA4P51532 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SMARCA4P51532 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC9.1□□□□□ -0.95
SMARCA4P51532 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SMARCA4P51532 IL6-206ENST00000407492 926 ntTSL 3 BASIC9.1□□□□□ -0.95
SMARCA4P51532 CYP2AC1P-201ENST00000407830 1173 ntBASIC9.1□□□□□ -0.95
SMARCA4P51532 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC9.1□□□□□ -0.95
SMARCA4P51532 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC9.1□□□□□ -0.95
SMARCA4P51532 RPL23AP1-201ENST00000428990 471 ntBASIC9.1□□□□□ -0.95
SMARCA4P51532 RPL10P17-201ENST00000453852 316 ntBASIC9.1□□□□□ -0.95
SMARCA4P51532 TAAR4P-201ENST00000454843 1039 ntBASIC9.1□□□□□ -0.95
SMARCA4P51532 AC013356.1-201ENST00000489027 564 ntBASIC9.1□□□□□ -0.95
SMARCA4P51532 AC098976.1-201ENST00000513014 541 ntBASIC9.1□□□□□ -0.95
SMARCA4P51532 HMGN1P9-201ENST00000515212 298 ntBASIC9.1□□□□□ -0.95
SMARCA4P51532 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC9.1□□□□□ -0.95
SMARCA4P51532 MIR4715-201ENST00000584117 79 ntBASIC9.1□□□□□ -0.95
SMARCA4P51532 AC010857.1-201ENST00000606398 594 ntBASIC9.1□□□□□ -0.95
SMARCA4P51532 AP001521.2-201ENST00000608772 546 ntBASIC9.1□□□□□ -0.95
SMARCA4P51532 AC079298.1-201ENST00000625026 1619 ntBASIC9.1□□□□□ -0.95
SMARCA4P51532 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SMARCA4P51532 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SMARCA4P51532 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC9.1□□□□□ -0.95
SMARCA4P51532 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
SMARCA4P51532 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
SMARCA4P51532 RPL12P43-201ENST00000420608 499 ntBASIC9.09□□□□□ -0.95
SMARCA4P51532 NRBF2P3-201ENST00000432731 865 ntBASIC9.09□□□□□ -0.95
SMARCA4P51532 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC9.09□□□□□ -0.95
SMARCA4P51532 RN7SL319P-201ENST00000480656 221 ntBASIC9.09□□□□□ -0.95
SMARCA4P51532 AC083829.1-201ENST00000503756 657 ntBASIC9.09□□□□□ -0.95
SMARCA4P51532 RN7SKP276-201ENST00000516242 268 ntBASIC9.09□□□□□ -0.95
SMARCA4P51532 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC9.09□□□□□ -0.95
SMARCA4P51532 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SMARCA4P51532 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SMARCA4P51532 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SMARCA4P51532 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC9.09□□□□□ -0.95
SMARCA4P51532 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC9.09□□□□□ -0.95
SMARCA4P51532 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SMARCA4P51532 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SMARCA4P51532 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SMARCA4P51532 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SMARCA4P51532 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
SMARCA4P51532 U3.10-201ENST00000364459 214 ntBASIC9.09□□□□□ -0.95
SMARCA4P51532 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SMARCA4P51532 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC9.09□□□□□ -0.95
SMARCA4P51532 FABP7P1-201ENST00000424004 391 ntBASIC9.09□□□□□ -0.95
SMARCA4P51532 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC9.09□□□□□ -0.95
SMARCA4P51532 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC9.09□□□□□ -0.95
SMARCA4P51532 TRIM60P9Y-201ENST00000438459 816 ntBASIC9.09□□□□□ -0.95
SMARCA4P51532 TRIM60P11Y-201ENST00000445313 801 ntBASIC9.09□□□□□ -0.95
SMARCA4P51532 AC000111.2-201ENST00000448200 210 ntBASIC9.09□□□□□ -0.95
SMARCA4P51532 snoU13.1-201ENST00000459157 104 ntBASIC9.09□□□□□ -0.95
SMARCA4P51532 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC9.09□□□□□ -0.95
SMARCA4P51532 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC9.09□□□□□ -0.95
SMARCA4P51532 DERA-209ENST00000532964 854 ntTSL 5 BASIC9.09□□□□□ -0.95
SMARCA4P51532 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC9.09□□□□□ -0.95
SMARCA4P51532 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC9.09□□□□□ -0.95
SMARCA4P51532 AC006338.2-201ENST00000616864 791 ntBASIC9.09□□□□□ -0.95
SMARCA4P51532 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.95
SMARCA4P51532 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SMARCA4P51532 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SMARCA4P51532 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SMARCA4P51532 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SMARCA4P51532 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SMARCA4P51532 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SMARCA4P51532 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SMARCA4P51532 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SMARCA4P51532 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SMARCA4P51532 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SMARCA4P51532 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC9.08□□□□□ -0.96
SMARCA4P51532 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SMARCA4P51532 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SMARCA4P51532 OR4K15-201ENST00000305051 1216 ntBASIC9.08□□□□□ -0.96
SMARCA4P51532 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC9.08□□□□□ -0.96
SMARCA4P51532 SNORA2.3-201ENST00000383920 135 ntBASIC9.08□□□□□ -0.96
SMARCA4P51532 AL021331.1-201ENST00000402817 582 ntBASIC9.08□□□□□ -0.96
SMARCA4P51532 IGKV1OR9-1-201ENST00000424370 284 ntBASIC9.08□□□□□ -0.96
SMARCA4P51532 MRPS21P2-201ENST00000424704 264 ntBASIC9.08□□□□□ -0.96
SMARCA4P51532 TXNP2-201ENST00000443918 295 ntBASIC9.08□□□□□ -0.96
SMARCA4P51532 CEACAMP6-201ENST00000452007 574 ntBASIC9.08□□□□□ -0.96
SMARCA4P51532 RPL23AP56-201ENST00000460778 453 ntBASIC9.08□□□□□ -0.96
SMARCA4P51532 IMPA1P1-201ENST00000510718 842 ntBASIC9.08□□□□□ -0.96
SMARCA4P51532 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC9.08□□□□□ -0.96
SMARCA4P51532 ENPP7P9-201ENST00000514456 627 ntBASIC9.08□□□□□ -0.96
SMARCA4P51532 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC9.08□□□□□ -0.96
SMARCA4P51532 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
SMARCA4P51532 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC9.08□□□□□ -0.96
SMARCA4P51532 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
SMARCA4P51532 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
SMARCA4P51532 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC9.08□□□□□ -0.96
SMARCA4P51532 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms