Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FLJ42393-201ENST00000623801 2270 ntBASIC7.13□□□□□ -1.27
RNF144AP50876 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF144AP50876 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF144AP50876 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF144AP50876 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
RNF144AP50876 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF144AP50876 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.12□□□□□ -1.27
RNF144AP50876 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
RNF144AP50876 LINC02128-205ENST00000641755 1334 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.12□□□□□ -1.27
RNF144AP50876 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 FAM32BP-201ENST00000344033 333 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 RNA5SP389-201ENST00000362610 115 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 RNA5SP226-201ENST00000362653 115 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 SNORA71D-201ENST00000363484 134 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 RNA5SP161-201ENST00000363871 115 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 RNA5SP149-201ENST00000364952 92 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 Y_RNA.474-201ENST00000384341 102 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 RNA5SP185-201ENST00000390963 114 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 RN7SKP129-201ENST00000410288 299 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 Y_RNA.608-201ENST00000410647 95 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.12□□□□□ -1.27
RNF144AP50876 RPL12P27-201ENST00000414870 496 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 SPA17P1-201ENST00000416656 452 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 RAD23BP1-201ENST00000421404 1227 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF144AP50876 NPM1P34-201ENST00000428821 893 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 DYNLL1P7-201ENST00000429273 258 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF144AP50876 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF144AP50876 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC7.12□□□□□ -1.27
RNF144AP50876 AC132479.1-201ENST00000449160 144 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 PRELID1P3-201ENST00000450055 643 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 MCHR2-AS1-204ENST00000452482 821 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF144AP50876 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.12□□□□□ -1.27
RNF144AP50876 RPL10P6-201ENST00000457497 318 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 AC234782.3-201ENST00000461229 433 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC7.12□□□□□ -1.27
RNF144AP50876 AC073594.1-201ENST00000462065 364 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF144AP50876 OR7E99P-201ENST00000505750 922 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF144AP50876 NTAN1P2-201ENST00000515730 940 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 RNU6-1046P-201ENST00000516538 107 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 RNU6-264P-201ENST00000517134 104 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 MTND6P19-201ENST00000519399 524 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 AP003467.2-201ENST00000520175 319 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.12□□□□□ -1.27
RNF144AP50876 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF144AP50876 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.12□□□□□ -1.27
RNF144AP50876 AC092868.1-201ENST00000557949 802 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC7.12□□□□□ -1.27
RNF144AP50876 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC7.12□□□□□ -1.27
RNF144AP50876 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
RNF144AP50876 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC7.12□□□□□ -1.27
RNF144AP50876 VN1R107P-201ENST00000601784 209 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 AL356052.1-201ENST00000605764 376 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 AC090948.1-201ENST00000607464 549 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF144AP50876 AC012488.1-201ENST00000611221 640 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF144AP50876 AC100810.6-201ENST00000638068 285 ntBASIC7.12□□□□□ -1.27
RNF144AP50876 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC7.12□□□□□ -1.27
RNF144AP50876 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF144AP50876 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
RNF144AP50876 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.12□□□□□ -1.27
RNF144AP50876 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
RNF144AP50876 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
RNF144AP50876 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RNF144AP50876 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF144AP50876 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC7.12□□□□□ -1.27
RNF144AP50876 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
RNF144AP50876 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF144AP50876 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
RNF144AP50876 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF144AP50876 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF144AP50876 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF144AP50876 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
RNF144AP50876 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF144AP50876 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms