Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
SSR1P43307 AC079097.1-201ENST00000512187 1399 ntBASIC5.85□□□□□ -1.47
SSR1P43307 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSR1P43307 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.85□□□□□ -1.47
SSR1P43307 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
SSR1P43307 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSR1P43307 RNU6-673P-201ENST00000365084 104 ntBASIC5.85□□□□□ -1.47
SSR1P43307 HMGB1P20-201ENST00000402555 677 ntBASIC5.85□□□□□ -1.47
SSR1P43307 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.85□□□□□ -1.47
SSR1P43307 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.85□□□□□ -1.47
SSR1P43307 NENFP1-201ENST00000419476 466 ntBASIC5.85□□□□□ -1.47
SSR1P43307 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.85□□□□□ -1.47
SSR1P43307 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.85□□□□□ -1.47
SSR1P43307 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.85□□□□□ -1.47
SSR1P43307 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.85□□□□□ -1.47
SSR1P43307 AC107015.1-201ENST00000466902 747 ntBASIC5.85□□□□□ -1.47
SSR1P43307 RPS17P15-201ENST00000475609 349 ntBASIC5.85□□□□□ -1.47
SSR1P43307 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.85□□□□□ -1.47
SSR1P43307 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.85□□□□□ -1.47
SSR1P43307 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.85□□□□□ -1.47
SSR1P43307 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.85□□□□□ -1.47
SSR1P43307 AP000648.1-201ENST00000529682 397 ntBASIC5.85□□□□□ -1.47
SSR1P43307 TOMM20P1-201ENST00000534518 427 ntBASIC5.85□□□□□ -1.47
SSR1P43307 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.85□□□□□ -1.47
SSR1P43307 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
SSR1P43307 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.85□□□□□ -1.47
SSR1P43307 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSR1P43307 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.85□□□□□ -1.47
SSR1P43307 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.85□□□□□ -1.47
SSR1P43307 MIR4271-201ENST00000582451 67 ntBASIC5.85□□□□□ -1.47
SSR1P43307 H3F3BP2-201ENST00000583907 357 ntBASIC5.85□□□□□ -1.47
SSR1P43307 AC079315.1-201ENST00000602952 623 ntBASIC5.85□□□□□ -1.47
SSR1P43307 AL031601.1-201ENST00000605702 394 ntBASIC5.85□□□□□ -1.47
SSR1P43307 MIR6133-201ENST00000617057 108 ntBASIC5.85□□□□□ -1.47
SSR1P43307 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.85□□□□□ -1.47
SSR1P43307 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.85□□□□□ -1.47
SSR1P43307 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.85□□□□□ -1.47
SSR1P43307 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.85□□□□□ -1.47
SSR1P43307 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSR1P43307 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSR1P43307 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSR1P43307 AL513548.1-201ENST00000562904 1724 ntBASIC5.85□□□□□ -1.47
SSR1P43307 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSR1P43307 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSR1P43307 VN2R3P-201ENST00000422626 1412 ntBASIC5.84□□□□□ -1.47
SSR1P43307 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
SSR1P43307 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSR1P43307 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSR1P43307 OR14L1P-202ENST00000641545 3009 ntBASIC5.84□□□□□ -1.47
SSR1P43307 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSR1P43307 RN7SKP145-201ENST00000363291 303 ntBASIC5.84□□□□□ -1.47
SSR1P43307 RN7SKP275-201ENST00000364626 301 ntBASIC5.84□□□□□ -1.47
SSR1P43307 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.84□□□□□ -1.47
SSR1P43307 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSR1P43307 RNU6-1320P-201ENST00000390838 107 ntBASIC5.84□□□□□ -1.47
SSR1P43307 RNU6-1269P-201ENST00000391139 107 ntBASIC5.84□□□□□ -1.47
SSR1P43307 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSR1P43307 RN7SKP240-201ENST00000410583 375 ntBASIC5.84□□□□□ -1.47
SSR1P43307 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.84□□□□□ -1.47
SSR1P43307 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.84□□□□□ -1.47
SSR1P43307 AL358176.3-201ENST00000420757 454 ntBASIC5.84□□□□□ -1.47
SSR1P43307 AC127526.2-201ENST00000426436 775 ntBASIC5.84□□□□□ -1.47
SSR1P43307 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.84□□□□□ -1.47
SSR1P43307 AC006335.2-201ENST00000437993 330 ntBASIC5.84□□□□□ -1.47
SSR1P43307 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.84□□□□□ -1.47
SSR1P43307 RNU6-599P-201ENST00000459383 107 ntBASIC5.84□□□□□ -1.47
SSR1P43307 RNU6-1193P-201ENST00000459461 107 ntBASIC5.84□□□□□ -1.47
SSR1P43307 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.84□□□□□ -1.47
SSR1P43307 RPS23P6-201ENST00000466136 431 ntBASIC5.84□□□□□ -1.47
SSR1P43307 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSR1P43307 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.84□□□□□ -1.47
SSR1P43307 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.84□□□□□ -1.47
SSR1P43307 RNA5SP271-201ENST00000516700 88 ntBASIC5.84□□□□□ -1.47
SSR1P43307 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.84□□□□□ -1.47
SSR1P43307 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.84□□□□□ -1.47
SSR1P43307 OR4A17P-201ENST00000526032 904 ntBASIC5.84□□□□□ -1.47
SSR1P43307 TRIM51DP-201ENST00000529746 596 ntBASIC5.84□□□□□ -1.47
SSR1P43307 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.84□□□□□ -1.47
SSR1P43307 AC233280.2-201ENST00000603917 1070 ntBASIC5.84□□□□□ -1.47
SSR1P43307 AC009704.2-201ENST00000618739 483 ntBASIC5.84□□□□□ -1.47
SSR1P43307 RNU6-368P-201ENST00000620928 107 ntBASIC5.84□□□□□ -1.47
SSR1P43307 RNU6-538P-201ENST00000622329 107 ntBASIC5.84□□□□□ -1.47
SSR1P43307 SRRM1P3-201ENST00000426911 2678 ntBASIC5.84□□□□□ -1.47
SSR1P43307 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
SSR1P43307 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.84□□□□□ -1.47
SSR1P43307 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.48
SSR1P43307 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.84□□□□□ -1.48
SSR1P43307 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
SSR1P43307 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.83□□□□□ -1.48
SSR1P43307 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSR1P43307 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSR1P43307 AC106872.5-201ENST00000508856 1416 ntBASIC5.83□□□□□ -1.48
SSR1P43307 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SSR1P43307 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSR1P43307 CASC19-204ENST00000641001 2055 ntBASIC5.83□□□□□ -1.48
SSR1P43307 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.83□□□□□ -1.48
SSR1P43307 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SSR1P43307 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSR1P43307 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SSR1P43307 OR52B3P-201ENST00000314715 928 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms