Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ARL5AP3-201ENST00000439327 386 ntBASIC5.81□□□□□ -1.48
CTNNA1P35221 AL512637.1-201ENST00000439523 1231 ntBASIC5.81□□□□□ -1.48
CTNNA1P35221 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.81□□□□□ -1.48
CTNNA1P35221 AL358876.1-201ENST00000453364 1075 ntBASIC5.81□□□□□ -1.48
CTNNA1P35221 RPS23P6-201ENST00000466136 431 ntBASIC5.81□□□□□ -1.48
CTNNA1P35221 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.81□□□□□ -1.48
CTNNA1P35221 RN7SL583P-201ENST00000475692 287 ntBASIC5.81□□□□□ -1.48
CTNNA1P35221 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.81□□□□□ -1.48
CTNNA1P35221 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.81□□□□□ -1.48
CTNNA1P35221 RN7SKP183-201ENST00000517169 324 ntBASIC5.81□□□□□ -1.48
CTNNA1P35221 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.81□□□□□ -1.48
CTNNA1P35221 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.81□□□□□ -1.48
CTNNA1P35221 AC068305.2-201ENST00000550567 1205 ntBASIC5.81□□□□□ -1.48
CTNNA1P35221 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTNNA1P35221 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTNNA1P35221 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.81□□□□□ -1.48
CTNNA1P35221 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.81□□□□□ -1.48
CTNNA1P35221 AC025574.2-201ENST00000615621 514 ntBASIC5.81□□□□□ -1.48
CTNNA1P35221 AP001005.3-201ENST00000622049 129 ntBASIC5.81□□□□□ -1.48
CTNNA1P35221 OR8G3P-202ENST00000641572 1255 ntBASIC5.81□□□□□ -1.48
CTNNA1P35221 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.81□□□□□ -1.48
CTNNA1P35221 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.81□□□□□ -1.48
CTNNA1P35221 AC112198.2-201ENST00000426589 6996 ntBASIC5.81□□□□□ -1.48
CTNNA1P35221 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CTNNA1P35221 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CTNNA1P35221 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTNNA1P35221 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTNNA1P35221 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTNNA1P35221 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.8□□□□□ -1.48
CTNNA1P35221 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTNNA1P35221 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CTNNA1P35221 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTNNA1P35221 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTNNA1P35221 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.8□□□□□ -1.48
CTNNA1P35221 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.8□□□□□ -1.48
CTNNA1P35221 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTNNA1P35221 MT-TP-201ENST00000387461 68 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CTNNA1P35221 AL607077.1-201ENST00000401718 499 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
CTNNA1P35221 RNU6-564P-201ENST00000410983 104 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.8□□□□□ -1.48
CTNNA1P35221 AC127526.2-201ENST00000426436 775 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.8□□□□□ -1.48
CTNNA1P35221 HMGB3P24-201ENST00000433260 622 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.8□□□□□ -1.48
CTNNA1P35221 AC097523.2-201ENST00000435551 652 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 SCAND3P1-201ENST00000439854 1060 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 AC118758.1-202ENST00000454719 225 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 RPL9P15-201ENST00000491096 532 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 EIF3LP3-201ENST00000495197 822 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.8□□□□□ -1.48
CTNNA1P35221 AC122718.2-201ENST00000505325 591 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.8□□□□□ -1.48
CTNNA1P35221 IMPA1P1-201ENST00000510718 842 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 AC114781.3-201ENST00000512083 142 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.8□□□□□ -1.48
CTNNA1P35221 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.8□□□□□ -1.48
CTNNA1P35221 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.8□□□□□ -1.48
CTNNA1P35221 MRPS16P1-201ENST00000523462 412 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.8□□□□□ -1.48
CTNNA1P35221 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.8□□□□□ -1.48
CTNNA1P35221 NMNAT1P5-201ENST00000559657 841 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 AC009852.2-201ENST00000567898 485 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.8□□□□□ -1.48
CTNNA1P35221 AC124856.1-201ENST00000600819 896 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 FAM72A-208ENST00000607379 1139 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.8□□□□□ -1.48
CTNNA1P35221 RN7SL544P-201ENST00000617232 284 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 RN7SL763P-201ENST00000620922 284 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 AC129778.1-202ENST00000623812 261 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 AL591379.1-207ENST00000635982 261 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.8□□□□□ -1.48
CTNNA1P35221 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CTNNA1P35221 AC144833.1-201ENST00000567953 4089 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
CTNNA1P35221 TCP11X1-202ENST00000622971 1372 ntBASIC5.8□□□□□ -1.48
CTNNA1P35221 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA1P35221 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA1P35221 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA1P35221 LINC01963-201ENST00000562038 3148 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA1P35221 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA1P35221 STX3-208ENST00000641815 3236 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
CTNNA1P35221 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.79□□□□□ -1.48
CTNNA1P35221 AC007342.7-201ENST00000624610 2337 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.79□□□□□ -1.48
CTNNA1P35221 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA1P35221 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA1P35221 RNU1-65P-201ENST00000363919 148 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTNNA1P35221 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.79□□□□□ -1.48
CTNNA1P35221 MTND2P2-201ENST00000434633 945 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.79□□□□□ -1.48
CTNNA1P35221 MRE11P1-201ENST00000464884 2127 ntBASIC5.79□□□□□ -1.48
CTNNA1P35221 AC087672.1-201ENST00000479876 766 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms