Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AP001025.3-201ENST00000578787 864 ntTSL 3 BASIC6.31□□□□□ -1.4
VAMP1P23763 MIR4512-201ENST00000583257 77 ntBASIC6.31□□□□□ -1.4
VAMP1P23763 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.31□□□□□ -1.4
VAMP1P23763 AC005498.2-201ENST00000590579 326 ntTSL 2 BASIC6.31□□□□□ -1.4
VAMP1P23763 AC022916.3-201ENST00000592961 742 ntBASIC6.31□□□□□ -1.4
VAMP1P23763 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.31□□□□□ -1.4
VAMP1P23763 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.31□□□□□ -1.4
VAMP1P23763 AL121917.2-201ENST00000605044 390 ntBASIC6.31□□□□□ -1.4
VAMP1P23763 NDUFA8P1-201ENST00000605525 367 ntBASIC6.31□□□□□ -1.4
VAMP1P23763 AC090948.2-201ENST00000607363 564 ntBASIC6.31□□□□□ -1.4
VAMP1P23763 AP005329.3-201ENST00000609924 686 ntBASIC6.31□□□□□ -1.4
VAMP1P23763 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC6.31□□□□□ -1.4
VAMP1P23763 AC087241.4-201ENST00000612441 480 ntBASIC6.31□□□□□ -1.4
VAMP1P23763 AL133351.5-201ENST00000612789 106 ntBASIC6.31□□□□□ -1.4
VAMP1P23763 FRG1HP-203ENST00000615326 593 ntTSL 3 BASIC6.31□□□□□ -1.4
VAMP1P23763 AC025588.4-201ENST00000615802 908 ntBASIC6.31□□□□□ -1.4
VAMP1P23763 AC108479.2-201ENST00000617314 601 ntBASIC6.31□□□□□ -1.4
VAMP1P23763 AC245100.4-207ENST00000640776 1082 ntBASIC6.31□□□□□ -1.4
VAMP1P23763 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
VAMP1P23763 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.31□□□□□ -1.4
VAMP1P23763 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VAMP1P23763 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VAMP1P23763 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.31□□□□□ -1.4
VAMP1P23763 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VAMP1P23763 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.31□□□□□ -1.4
VAMP1P23763 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
VAMP1P23763 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VAMP1P23763 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VAMP1P23763 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.3□□□□□ -1.4
VAMP1P23763 SAMMSON-213ENST00000641336 1521 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VAMP1P23763 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VAMP1P23763 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VAMP1P23763 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
VAMP1P23763 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VAMP1P23763 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
VAMP1P23763 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
VAMP1P23763 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
VAMP1P23763 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VAMP1P23763 OSCP1-202ENST00000354267 767 ntTSL 5 BASIC6.3□□□□□ -1.4
VAMP1P23763 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
VAMP1P23763 RNU6-809P-201ENST00000384461 107 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 SNORA40.3-201ENST00000390964 122 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 ARF4P3-201ENST00000397387 509 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 DHFRP6-201ENST00000401776 268 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 MIR1305-201ENST00000408300 86 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 Y_RNA.598-201ENST00000410480 95 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 HMGN1P14-201ENST00000412459 517 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC6.3□□□□□ -1.4
VAMP1P23763 SRGAP3-AS3-201ENST00000432981 1223 ntTSL 2 BASIC6.3□□□□□ -1.4
VAMP1P23763 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.3□□□□□ -1.4
VAMP1P23763 AL162724.1-201ENST00000437461 373 ntTSL 2 BASIC6.3□□□□□ -1.4
VAMP1P23763 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.3□□□□□ -1.4
VAMP1P23763 ACTP1-201ENST00000440793 383 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.3□□□□□ -1.4
VAMP1P23763 AL357520.1-201ENST00000441557 453 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 FO393419.1-201ENST00000443746 355 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 MYL6P1-201ENST00000449877 453 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 NPM1P9-201ENST00000453156 844 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC6.3□□□□□ -1.4
VAMP1P23763 AL139156.3-201ENST00000454802 394 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.3□□□□□ -1.4
VAMP1P23763 OR9M1P-201ENST00000459641 921 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 RPSAP48-201ENST00000466509 889 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 AC104563.1-201ENST00000476147 376 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 AC107029.1-201ENST00000484675 465 ntTSL 2 BASIC6.3□□□□□ -1.4
VAMP1P23763 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC6.3□□□□□ -1.4
VAMP1P23763 AC093767.1-201ENST00000504523 156 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 AC022447.3-201ENST00000506865 495 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC6.3□□□□□ -1.4
VAMP1P23763 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.3□□□□□ -1.4
VAMP1P23763 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.3□□□□□ -1.4
VAMP1P23763 OR10J2P-201ENST00000514684 961 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 LINC00499-204ENST00000515282 579 ntTSL 5 BASIC6.3□□□□□ -1.4
VAMP1P23763 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC6.3□□□□□ -1.4
VAMP1P23763 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.3□□□□□ -1.4
VAMP1P23763 IGHV3-32-201ENST00000519182 355 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 NACA2-201ENST00000521764 777 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
VAMP1P23763 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC6.3□□□□□ -1.4
VAMP1P23763 HSPA8P13-201ENST00000523715 472 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC6.3□□□□□ -1.4
VAMP1P23763 AP003108.2-208ENST00000543044 883 ntTSL 3 BASIC6.3□□□□□ -1.4
VAMP1P23763 LINC02373-201ENST00000549261 423 ntTSL 3 BASIC6.3□□□□□ -1.4
VAMP1P23763 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.3□□□□□ -1.4
VAMP1P23763 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.3□□□□□ -1.4
VAMP1P23763 PABPN1-208ENST00000557702 778 ntTSL 2 BASIC6.3□□□□□ -1.4
VAMP1P23763 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC6.3□□□□□ -1.4
VAMP1P23763 AP001180.3-201ENST00000582221 145 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 MIR544B-201ENST00000582372 78 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 SRP68P1-201ENST00000584247 269 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 AC005381.1-204ENST00000585697 599 ntTSL 3 BASIC6.3□□□□□ -1.4
VAMP1P23763 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC6.3□□□□□ -1.4
VAMP1P23763 TPMTP1-201ENST00000592307 737 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 AC016629.2-201ENST00000597341 199 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.3□□□□□ -1.4
VAMP1P23763 AP000403.1-201ENST00000603349 851 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 AL513477.2-201ENST00000607858 568 ntBASIC6.3□□□□□ -1.4
VAMP1P23763 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
VAMP1P23763 AC084876.1-201ENST00000612793 641 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms