Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.3□□□□□ -1.72
CCL3L1P16619 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.3□□□□□ -1.72
CCL3L1P16619 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CCL3L1P16619 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.3□□□□□ -1.72
CCL3L1P16619 SUMO2P15-201ENST00000604285 278 ntBASIC4.3□□□□□ -1.72
CCL3L1P16619 AC026367.3-201ENST00000619032 590 ntBASIC4.3□□□□□ -1.72
CCL3L1P16619 AC090527.3-201ENST00000619041 548 ntBASIC4.3□□□□□ -1.72
CCL3L1P16619 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL3L1P16619 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL3L1P16619 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCL3L1P16619 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC4.3□□□□□ -1.72
CCL3L1P16619 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC4.3□□□□□ -1.72
CCL3L1P16619 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL3L1P16619 AC004158.1-201ENST00000564508 4319 ntBASIC4.3□□□□□ -1.72
CCL3L1P16619 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCL3L1P16619 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL3L1P16619 AL031595.2-201ENST00000624215 19071 ntBASIC4.3□□□□□ -1.72
CCL3L1P16619 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCL3L1P16619 ZNF402P-201ENST00000404435 3100 ntBASIC4.3□□□□□ -1.72
CCL3L1P16619 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL3L1P16619 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL3L1P16619 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCL3L1P16619 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCL3L1P16619 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC4.29□□□□□ -1.72
CCL3L1P16619 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL3L1P16619 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCL3L1P16619 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCL3L1P16619 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCL3L1P16619 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCL3L1P16619 MIR223-201ENST00000385204 110 ntBASIC4.29□□□□□ -1.72
CCL3L1P16619 RN7SKP126-201ENST00000411143 300 ntBASIC4.29□□□□□ -1.72
CCL3L1P16619 MARK2P12-201ENST00000420129 585 ntBASIC4.29□□□□□ -1.72
CCL3L1P16619 EI24P4-201ENST00000423683 1078 ntBASIC4.29□□□□□ -1.72
CCL3L1P16619 HSPD1P12-201ENST00000429127 1069 ntBASIC4.29□□□□□ -1.72
CCL3L1P16619 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.29□□□□□ -1.72
CCL3L1P16619 AL161722.2-201ENST00000434731 981 ntBASIC4.29□□□□□ -1.72
CCL3L1P16619 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.29□□□□□ -1.72
CCL3L1P16619 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL3L1P16619 REG1CP-206ENST00000447469 496 ntBASIC4.29□□□□□ -1.72
CCL3L1P16619 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL3L1P16619 AC074386.1-201ENST00000476560 767 ntBASIC4.29□□□□□ -1.72
CCL3L1P16619 RPS18P6-201ENST00000476880 458 ntBASIC4.29□□□□□ -1.72
CCL3L1P16619 RN7SL629P-201ENST00000489622 285 ntBASIC4.29□□□□□ -1.72
CCL3L1P16619 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.29□□□□□ -1.72
CCL3L1P16619 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.29□□□□□ -1.72
CCL3L1P16619 AC134349.2-201ENST00000535136 910 ntBASIC4.29□□□□□ -1.72
CCL3L1P16619 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL3L1P16619 AC024940.3-201ENST00000538551 316 ntBASIC4.29□□□□□ -1.72
CCL3L1P16619 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.29□□□□□ -1.72
CCL3L1P16619 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.29□□□□□ -1.72
CCL3L1P16619 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.29□□□□□ -1.72
CCL3L1P16619 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL3L1P16619 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.29□□□□□ -1.72
CCL3L1P16619 AP000894.4-201ENST00000610185 483 ntBASIC4.29□□□□□ -1.72
CCL3L1P16619 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCL3L1P16619 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL3L1P16619 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCL3L1P16619 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCL3L1P16619 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.29□□□□□ -1.72
CCL3L1P16619 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCL3L1P16619 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CCL3L1P16619 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CCL3L1P16619 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.29□□□□□ -1.72
CCL3L1P16619 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL3L1P16619 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCL3L1P16619 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCL3L1P16619 RARSP1-201ENST00000542842 1418 ntBASIC4.29□□□□□ -1.72
CCL3L1P16619 CIR1P2-201ENST00000514821 1342 ntBASIC4.28□□□□□ -1.72
CCL3L1P16619 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCL3L1P16619 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CCL3L1P16619 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CCL3L1P16619 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CCL3L1P16619 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.28□□□□□ -1.72
CCL3L1P16619 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCL3L1P16619 U3.7-201ENST00000363668 216 ntBASIC4.28□□□□□ -1.72
CCL3L1P16619 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.28□□□□□ -1.72
CCL3L1P16619 AC079809.1-201ENST00000415468 276 ntBASIC4.28□□□□□ -1.72
CCL3L1P16619 HYALP1-201ENST00000417674 1279 ntBASIC4.28□□□□□ -1.72
CCL3L1P16619 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.28□□□□□ -1.72
CCL3L1P16619 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.28□□□□□ -1.72
CCL3L1P16619 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.28□□□□□ -1.72
CCL3L1P16619 GAPDHP58-201ENST00000438477 1006 ntBASIC4.28□□□□□ -1.72
CCL3L1P16619 CNOT7P2-201ENST00000441051 832 ntBASIC4.28□□□□□ -1.72
CCL3L1P16619 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.28□□□□□ -1.72
CCL3L1P16619 DNAJB5P1-201ENST00000454004 806 ntBASIC4.28□□□□□ -1.72
CCL3L1P16619 AC128716.1-201ENST00000475129 166 ntBASIC4.28□□□□□ -1.72
CCL3L1P16619 RN7SL222P-201ENST00000476452 299 ntBASIC4.28□□□□□ -1.72
CCL3L1P16619 AC079841.1-201ENST00000481228 950 ntBASIC4.28□□□□□ -1.72
CCL3L1P16619 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCL3L1P16619 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.28□□□□□ -1.72
CCL3L1P16619 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.28□□□□□ -1.72
CCL3L1P16619 RNA5SP92-201ENST00000516437 110 ntBASIC4.28□□□□□ -1.72
CCL3L1P16619 SCARNA21.2-201ENST00000516600 166 ntBASIC4.28□□□□□ -1.72
CCL3L1P16619 RNA5SP34-201ENST00000516887 130 ntBASIC4.28□□□□□ -1.72
CCL3L1P16619 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CCL3L1P16619 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.28□□□□□ -1.72
CCL3L1P16619 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.28□□□□□ -1.72
CCL3L1P16619 AC090022.1-201ENST00000546569 311 ntBASIC4.28□□□□□ -1.72
CCL3L1P16619 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.28□□□□□ -1.72
CCL3L1P16619 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms