Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TOP2AP11388 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
TOP2AP11388 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
TOP2AP11388 MAPK10-270ENST00000641102 3538 ntBASIC8.94□□□□□ -0.98
TOP2AP11388 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC8.94□□□□□ -0.98
TOP2AP11388 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
TOP2AP11388 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
TOP2AP11388 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TOP2AP11388 RN7SKP153-201ENST00000365026 316 ntBASIC8.94□□□□□ -0.98
TOP2AP11388 AL451142.1-201ENST00000375867 775 ntBASIC8.94□□□□□ -0.98
TOP2AP11388 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TOP2AP11388 RN7SL385P-201ENST00000468873 276 ntBASIC8.94□□□□□ -0.98
TOP2AP11388 SCARNA22-201ENST00000503991 125 ntBASIC8.94□□□□□ -0.98
TOP2AP11388 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC8.94□□□□□ -0.98
TOP2AP11388 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.94□□□□□ -0.98
TOP2AP11388 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
TOP2AP11388 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC8.94□□□□□ -0.98
TOP2AP11388 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
TOP2AP11388 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
TOP2AP11388 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
TOP2AP11388 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TOP2AP11388 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC8.93□□□□□ -0.98
TOP2AP11388 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
TOP2AP11388 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC8.93□□□□□ -0.98
TOP2AP11388 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TOP2AP11388 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
TOP2AP11388 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
TOP2AP11388 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
TOP2AP11388 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
TOP2AP11388 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TOP2AP11388 ATP5HP3-201ENST00000396994 486 ntBASIC8.93□□□□□ -0.98
TOP2AP11388 SLC9B1P4-201ENST00000421957 1288 ntBASIC8.93□□□□□ -0.98
TOP2AP11388 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC8.93□□□□□ -0.98
TOP2AP11388 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TOP2AP11388 AC090018.1-201ENST00000434369 367 ntBASIC8.93□□□□□ -0.98
TOP2AP11388 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC8.93□□□□□ -0.98
TOP2AP11388 RN7SL481P-201ENST00000477764 299 ntBASIC8.93□□□□□ -0.98
TOP2AP11388 AC098976.1-201ENST00000513014 541 ntBASIC8.93□□□□□ -0.98
TOP2AP11388 AC079064.1-201ENST00000528365 362 ntBASIC8.93□□□□□ -0.98
TOP2AP11388 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC8.93□□□□□ -0.98
TOP2AP11388 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TOP2AP11388 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TOP2AP11388 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TOP2AP11388 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
TOP2AP11388 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC8.93□□□□□ -0.98
TOP2AP11388 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC8.93□□□□□ -0.98
TOP2AP11388 ZNF652P1-201ENST00000442420 1309 ntBASIC8.92□□□□□ -0.98
TOP2AP11388 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TOP2AP11388 AC104964.3-201ENST00000606115 2860 ntBASIC8.92□□□□□ -0.98
TOP2AP11388 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
TOP2AP11388 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
TOP2AP11388 SNORA2.3-201ENST00000383920 135 ntBASIC8.92□□□□□ -0.98
TOP2AP11388 RPS27AP7-201ENST00000422792 455 ntBASIC8.92□□□□□ -0.98
TOP2AP11388 CYCSP11-201ENST00000436426 315 ntBASIC8.92□□□□□ -0.98
TOP2AP11388 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC8.92□□□□□ -0.98
TOP2AP11388 AC090804.1-201ENST00000448870 490 ntBASIC8.92□□□□□ -0.98
TOP2AP11388 RN7SL189P-201ENST00000468631 289 ntBASIC8.92□□□□□ -0.98
TOP2AP11388 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC8.92□□□□□ -0.98
TOP2AP11388 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC8.92□□□□□ -0.98
TOP2AP11388 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TOP2AP11388 AL138960.1-201ENST00000613838 513 ntBASIC8.92□□□□□ -0.98
TOP2AP11388 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TOP2AP11388 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
TOP2AP11388 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
TOP2AP11388 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TOP2AP11388 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.92□□□□□ -0.98
TOP2AP11388 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TOP2AP11388 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
TOP2AP11388 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
TOP2AP11388 AL356967.1-201ENST00000406305 431 ntBASIC8.91□□□□□ -0.98
TOP2AP11388 AF186996.5-201ENST00000418098 904 ntBASIC8.91□□□□□ -0.98
TOP2AP11388 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
TOP2AP11388 RPS17P2-201ENST00000461663 408 ntBASIC8.91□□□□□ -0.98
TOP2AP11388 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC8.91□□□□□ -0.98
TOP2AP11388 AC020910.2-201ENST00000603635 610 ntBASIC8.91□□□□□ -0.98
TOP2AP11388 AC005618.4-201ENST00000625053 554 ntBASIC8.91□□□□□ -0.98
TOP2AP11388 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC8.91□□□□□ -0.98
TOP2AP11388 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC8.91□□□□□ -0.98
TOP2AP11388 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TOP2AP11388 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
TOP2AP11388 AC004158.1-201ENST00000564508 4319 ntBASIC8.91□□□□□ -0.98
TOP2AP11388 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TOP2AP11388 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
TOP2AP11388 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TOP2AP11388 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TOP2AP11388 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
TOP2AP11388 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
TOP2AP11388 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
TOP2AP11388 RN7SKP145-201ENST00000363291 303 ntBASIC8.9□□□□□ -0.98
TOP2AP11388 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
TOP2AP11388 U3.30-201ENST00000391308 210 ntBASIC8.9□□□□□ -0.98
TOP2AP11388 IGKV1OR9-1-201ENST00000424370 284 ntBASIC8.9□□□□□ -0.98
TOP2AP11388 AC017019.1-201ENST00000426129 261 ntBASIC8.9□□□□□ -0.98
TOP2AP11388 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC8.9□□□□□ -0.98
TOP2AP11388 SLC25A18P1-201ENST00000449385 454 ntBASIC8.9□□□□□ -0.98
TOP2AP11388 PSAT1P4-201ENST00000466500 526 ntBASIC8.9□□□□□ -0.98
TOP2AP11388 RPL12P20-201ENST00000475538 479 ntBASIC8.9□□□□□ -0.98
TOP2AP11388 AC022360.1-201ENST00000521058 340 ntBASIC8.9□□□□□ -0.98
TOP2AP11388 OR5M2P-201ENST00000529003 936 ntBASIC8.9□□□□□ -0.98
TOP2AP11388 ATP5J2P6-201ENST00000565203 266 ntBASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms