Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
APOC1P02654 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.8□□□□□ -1.64
APOC1P02654 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.8□□□□□ -1.64
APOC1P02654 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 SSXP3-201ENST00000442971 1300 ntBASIC4.8□□□□□ -1.64
APOC1P02654 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
APOC1P02654 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
APOC1P02654 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
APOC1P02654 OR7E25P-201ENST00000344844 931 ntBASIC4.8□□□□□ -1.64
APOC1P02654 RNU1-19P-201ENST00000363306 165 ntBASIC4.8□□□□□ -1.64
APOC1P02654 HMGB1P20-201ENST00000402555 677 ntBASIC4.8□□□□□ -1.64
APOC1P02654 HMGN1P20-201ENST00000411849 300 ntBASIC4.8□□□□□ -1.64
APOC1P02654 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.8□□□□□ -1.64
APOC1P02654 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.8□□□□□ -1.64
APOC1P02654 AKR1B10P1-201ENST00000425765 942 ntBASIC4.8□□□□□ -1.64
APOC1P02654 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.8□□□□□ -1.64
APOC1P02654 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.8□□□□□ -1.64
APOC1P02654 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.8□□□□□ -1.64
APOC1P02654 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.8□□□□□ -1.64
APOC1P02654 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.8□□□□□ -1.64
APOC1P02654 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.8□□□□□ -1.64
APOC1P02654 RPS23P6-201ENST00000466136 431 ntBASIC4.8□□□□□ -1.64
APOC1P02654 RN7SL583P-201ENST00000475692 287 ntBASIC4.8□□□□□ -1.64
APOC1P02654 RPL7AP10-201ENST00000481016 791 ntBASIC4.8□□□□□ -1.64
APOC1P02654 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.8□□□□□ -1.64
APOC1P02654 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 AC021193.1-201ENST00000511607 420 ntBASIC4.8□□□□□ -1.64
APOC1P02654 AC098976.1-201ENST00000513014 541 ntBASIC4.8□□□□□ -1.64
APOC1P02654 RNA5SP473-201ENST00000516402 125 ntBASIC4.8□□□□□ -1.64
APOC1P02654 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.8□□□□□ -1.64
APOC1P02654 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.8□□□□□ -1.64
APOC1P02654 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.8□□□□□ -1.64
APOC1P02654 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.8□□□□□ -1.64
APOC1P02654 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.8□□□□□ -1.64
APOC1P02654 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.8□□□□□ -1.64
APOC1P02654 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.8□□□□□ -1.64
APOC1P02654 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.8□□□□□ -1.64
APOC1P02654 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.8□□□□□ -1.64
APOC1P02654 AP001005.3-201ENST00000622049 129 ntBASIC4.8□□□□□ -1.64
APOC1P02654 AC015660.5-201ENST00000623238 564 ntBASIC4.8□□□□□ -1.64
APOC1P02654 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.8□□□□□ -1.64
APOC1P02654 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.8□□□□□ -1.64
APOC1P02654 AC073869.8-201ENST00000641806 335 ntBASIC4.8□□□□□ -1.64
APOC1P02654 AC008691.1-209ENST00000642094 814 ntBASIC4.8□□□□□ -1.64
APOC1P02654 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.8□□□□□ -1.64
APOC1P02654 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.8□□□□□ -1.64
APOC1P02654 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 AL731532.2-201ENST00000623542 1953 ntBASIC4.8□□□□□ -1.64
APOC1P02654 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
APOC1P02654 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.8□□□□□ -1.64
APOC1P02654 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
APOC1P02654 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
APOC1P02654 LINC01355-201ENST00000566551 5444 ntBASIC4.79□□□□□ -1.64
APOC1P02654 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC1P02654 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOC1P02654 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOC1P02654 MTCO1P22-201ENST00000604619 1360 ntBASIC4.79□□□□□ -1.64
APOC1P02654 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC1P02654 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC1P02654 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
APOC1P02654 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
APOC1P02654 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.79□□□□□ -1.64
APOC1P02654 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC1P02654 OR9K1P-201ENST00000326513 941 ntBASIC4.79□□□□□ -1.64
APOC1P02654 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
APOC1P02654 RNA5SP394-201ENST00000364216 119 ntBASIC4.79□□□□□ -1.64
APOC1P02654 UBBP2-201ENST00000376781 231 ntBASIC4.79□□□□□ -1.64
APOC1P02654 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
APOC1P02654 PPIAP9-201ENST00000403866 498 ntBASIC4.79□□□□□ -1.64
APOC1P02654 PCNPP4-201ENST00000414817 517 ntBASIC4.79□□□□□ -1.64
APOC1P02654 AC017019.1-201ENST00000426129 261 ntBASIC4.79□□□□□ -1.64
APOC1P02654 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.79□□□□□ -1.64
APOC1P02654 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.79□□□□□ -1.64
APOC1P02654 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
APOC1P02654 AC022795.1-201ENST00000473808 480 ntBASIC4.79□□□□□ -1.64
APOC1P02654 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.79□□□□□ -1.64
APOC1P02654 RNA5SP360-201ENST00000516555 118 ntBASIC4.79□□□□□ -1.64
APOC1P02654 SNORA43.3-201ENST00000517240 103 ntBASIC4.79□□□□□ -1.64
APOC1P02654 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.79□□□□□ -1.64
APOC1P02654 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.79□□□□□ -1.64
APOC1P02654 AL049872.1-201ENST00000556323 322 ntBASIC4.79□□□□□ -1.64
APOC1P02654 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.79□□□□□ -1.64
APOC1P02654 AC127024.5-201ENST00000580085 462 ntBASIC4.79□□□□□ -1.64
APOC1P02654 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.79□□□□□ -1.64
APOC1P02654 AC233280.2-201ENST00000603917 1070 ntBASIC4.79□□□□□ -1.64
APOC1P02654 AC108865.2-201ENST00000606881 432 ntBASIC4.79□□□□□ -1.64
APOC1P02654 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.79□□□□□ -1.64
APOC1P02654 AC006840.1-201ENST00000623069 542 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms