Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.24□□□□□ -2.05
USH2AO75445 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
USH2AO75445 AC000111.2-201ENST00000448200 210 ntBASIC2.24□□□□□ -2.05
USH2AO75445 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC2.24□□□□□ -2.05
USH2AO75445 MTND2P28-201ENST00000457540 1044 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AC021074.2-201ENST00000468434 172 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AL132838.2-201ENST00000492041 314 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.24□□□□□ -2.05
USH2AO75445 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC2.24□□□□□ -2.05
USH2AO75445 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC2.24□□□□□ -2.05
USH2AO75445 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
USH2AO75445 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
USH2AO75445 KCNB1-201ENST00000371741 11879 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC2.24□□□□□ -2.05
USH2AO75445 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC2.24□□□□□ -2.05
USH2AO75445 NWD1-201ENST00000379808 7254 ntTSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 AC007068.1-201ENST00000396690 844 ntBASIC2.24□□□□□ -2.05
USH2AO75445 OR8G2P-201ENST00000412796 908 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AL390879.2-203ENST00000426943 1121 ntBASIC2.24□□□□□ -2.05
USH2AO75445 RPL23AP93-201ENST00000440847 484 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC2.24□□□□□ -2.05
USH2AO75445 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.24□□□□□ -2.05
USH2AO75445 SOD1P3-201ENST00000518682 454 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC2.24□□□□□ -2.05
USH2AO75445 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 AC090948.1-201ENST00000607464 549 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AC007497.1-201ENST00000610421 561 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AL035461.2-201ENST00000619201 524 ntBASIC2.24□□□□□ -2.05
USH2AO75445 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC2.24□□□□□ -2.05
USH2AO75445 CDRT1-208ENST00000630868 794 ntBASIC2.24□□□□□ -2.05
USH2AO75445 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 AC004014.2-201ENST00000623718 5122 ntBASIC2.24□□□□□ -2.05
USH2AO75445 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 LCORL-207ENST00000635767 10430 ntTSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 AC006511.3-201ENST00000624929 1783 ntBASIC2.24□□□□□ -2.05
USH2AO75445 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.24□□□□□ -2.05
USH2AO75445 RPL23AP26-201ENST00000412728 464 ntBASIC2.24□□□□□ -2.05
USH2AO75445 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.24□□□□□ -2.05
USH2AO75445 AL157884.3-201ENST00000448273 1184 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC2.24□□□□□ -2.05
USH2AO75445 RN7SL703P-201ENST00000578485 302 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.24□□□□□ -2.05
USH2AO75445 AL138721.1-201ENST00000616756 179 ntBASIC2.24□□□□□ -2.05
USH2AO75445 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC2.24□□□□□ -2.05
USH2AO75445 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 AL031595.3-201ENST00000624919 14262 ntBASIC2.24□□□□□ -2.05
USH2AO75445 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC2.24□□□□□ -2.05
USH2AO75445 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 UGT2B26P-201ENST00000508672 1613 ntBASIC2.24□□□□□ -2.05
USH2AO75445 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
USH2AO75445 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC2.24□□□□□ -2.05
USH2AO75445 STX3-208ENST00000641815 3236 ntBASIC2.24□□□□□ -2.05
USH2AO75445 SPRR2C-201ENST00000290702 219 ntBASIC2.24□□□□□ -2.05
USH2AO75445 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 MIR218-2-201ENST00000385006 110 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AC233982.1-201ENST00000451247 436 ntBASIC2.24□□□□□ -2.05
USH2AO75445 PRPF38AP1-201ENST00000451976 933 ntBASIC2.24□□□□□ -2.05
USH2AO75445 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
USH2AO75445 MIR4420-201ENST00000583944 77 ntBASIC2.24□□□□□ -2.05
USH2AO75445 XIST-210ENST00000602863 775 ntTSL 3 BASIC2.24□□□□□ -2.05
USH2AO75445 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC2.24□□□□□ -2.05
USH2AO75445 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC2.24□□□□□ -2.05
USH2AO75445 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC2.24□□□□□ -2.05
USH2AO75445 AC009093.8-201ENST00000641769 292 ntBASIC2.24□□□□□ -2.05
USH2AO75445 AC073869.8-201ENST00000641806 335 ntBASIC2.24□□□□□ -2.05
USH2AO75445 CCPG1-201ENST00000310958 6822 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH2AO75445 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms