Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CHEK2P2-201ENST00000554701 672 ntBASIC8.29□□□□□ -1.08
RNF40O75150 AL117187.1-201ENST00000555482 181 ntBASIC8.29□□□□□ -1.08
RNF40O75150 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 AC091304.5-201ENST00000568969 158 ntBASIC8.29□□□□□ -1.08
RNF40O75150 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF40O75150 AC006270.2-201ENST00000578523 652 ntBASIC8.29□□□□□ -1.08
RNF40O75150 MIR5705-201ENST00000579870 89 ntBASIC8.29□□□□□ -1.08
RNF40O75150 MIR4307-201ENST00000582802 84 ntBASIC8.29□□□□□ -1.08
RNF40O75150 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC8.29□□□□□ -1.08
RNF40O75150 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF40O75150 AC125494.2-201ENST00000602431 657 ntBASIC8.29□□□□□ -1.08
RNF40O75150 NUTF2P8-201ENST00000604593 363 ntBASIC8.29□□□□□ -1.08
RNF40O75150 AC011816.2-201ENST00000607089 556 ntBASIC8.29□□□□□ -1.08
RNF40O75150 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF40O75150 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC8.29□□□□□ -1.08
RNF40O75150 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC8.29□□□□□ -1.08
RNF40O75150 RFPL4AP6-201ENST00000616792 846 ntBASIC8.29□□□□□ -1.08
RNF40O75150 STMN1P1-201ENST00000617809 440 ntBASIC8.29□□□□□ -1.08
RNF40O75150 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF40O75150 RPL23AP61-201ENST00000623642 466 ntBASIC8.29□□□□□ -1.08
RNF40O75150 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF40O75150 AL590396.3-201ENST00000636334 300 ntBASIC8.29□□□□□ -1.08
RNF40O75150 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF40O75150 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC8.29□□□□□ -1.08
RNF40O75150 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 AL022163.1-201ENST00000430261 1569 ntBASIC8.29□□□□□ -1.08
RNF40O75150 ZNF812P-201ENST00000457674 1694 ntBASIC8.29□□□□□ -1.08
RNF40O75150 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.29□□□□□ -1.08
RNF40O75150 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.29□□□□□ -1.08
RNF40O75150 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF40O75150 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF40O75150 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RNF40O75150 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF40O75150 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC8.28□□□□□ -1.08
RNF40O75150 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RNF40O75150 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RNF40O75150 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
RNF40O75150 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
RNF40O75150 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RNF40O75150 AC087203.2-201ENST00000526502 1587 ntBASIC8.28□□□□□ -1.08
RNF40O75150 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RNF40O75150 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RNF40O75150 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.28□□□□□ -1.08
RNF40O75150 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RNF40O75150 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RNF40O75150 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RNF40O75150 MIR217-201ENST00000384817 110 ntBASIC8.28□□□□□ -1.08
RNF40O75150 EI24P3-201ENST00000399046 1062 ntBASIC8.28□□□□□ -1.08
RNF40O75150 VIM2P-201ENST00000402383 1294 ntBASIC8.28□□□□□ -1.08
RNF40O75150 RN7SKP29-201ENST00000410957 272 ntBASIC8.28□□□□□ -1.08
RNF40O75150 AL359704.1-201ENST00000411586 781 ntBASIC8.28□□□□□ -1.08
RNF40O75150 RPL12P27-201ENST00000414870 496 ntBASIC8.28□□□□□ -1.08
RNF40O75150 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RNF40O75150 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RNF40O75150 RPL35AP12-201ENST00000425362 338 ntBASIC8.28□□□□□ -1.08
RNF40O75150 DSTNP5-201ENST00000427921 523 ntBASIC8.28□□□□□ -1.08
RNF40O75150 RPL7P54-201ENST00000438336 674 ntBASIC8.28□□□□□ -1.08
RNF40O75150 SEPT14P3-201ENST00000439401 183 ntBASIC8.28□□□□□ -1.08
RNF40O75150 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC8.28□□□□□ -1.08
RNF40O75150 AL732372.2-207ENST00000445840 183 ntBASIC8.28□□□□□ -1.08
RNF40O75150 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.28□□□□□ -1.08
RNF40O75150 AC005840.2-201ENST00000447193 355 ntBASIC8.28□□□□□ -1.08
RNF40O75150 AC132479.1-201ENST00000449160 144 ntBASIC8.28□□□□□ -1.08
RNF40O75150 SEPT14P2-201ENST00000453405 183 ntBASIC8.28□□□□□ -1.08
RNF40O75150 AC009022.1-201ENST00000472115 496 ntBASIC8.28□□□□□ -1.08
RNF40O75150 AC127024.1-201ENST00000490847 418 ntBASIC8.28□□□□□ -1.08
RNF40O75150 SEPT14P4-201ENST00000513445 186 ntBASIC8.28□□□□□ -1.08
RNF40O75150 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC8.28□□□□□ -1.08
RNF40O75150 FO082796.1-201ENST00000523795 183 ntBASIC8.28□□□□□ -1.08
RNF40O75150 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC8.28□□□□□ -1.08
RNF40O75150 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC8.28□□□□□ -1.08
RNF40O75150 PHBP17-201ENST00000528576 541 ntBASIC8.28□□□□□ -1.08
RNF40O75150 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC8.28□□□□□ -1.08
RNF40O75150 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC8.28□□□□□ -1.08
RNF40O75150 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC8.28□□□□□ -1.08
RNF40O75150 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC8.28□□□□□ -1.08
RNF40O75150 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC8.28□□□□□ -1.08
RNF40O75150 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC8.28□□□□□ -1.08
RNF40O75150 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC8.28□□□□□ -1.08
RNF40O75150 AC110994.2-201ENST00000635481 492 ntBASIC8.28□□□□□ -1.08
RNF40O75150 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC8.28□□□□□ -1.08
RNF40O75150 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC8.28□□□□□ -1.08
RNF40O75150 AC018765.1-201ENST00000623357 3446 ntBASIC8.28□□□□□ -1.08
RNF40O75150 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RNF40O75150 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RNF40O75150 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC8.28□□□□□ -1.08
RNF40O75150 AC123769.2-201ENST00000624332 5984 ntBASIC8.28□□□□□ -1.08
RNF40O75150 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RNF40O75150 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
RNF40O75150 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RNF40O75150 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
RNF40O75150 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC8.28□□□□□ -1.08
RNF40O75150 AC010928.1-201ENST00000592477 1447 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms