Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 BX119321.1-201ENST00000428912 797 ntBASIC5.08□□□□□ -1.6
SCN2BO60939 AC002069.1-201ENST00000429649 1159 ntBASIC5.08□□□□□ -1.6
SCN2BO60939 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN2BO60939 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN2BO60939 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN2BO60939 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN2BO60939 NOP56P2-201ENST00000447491 769 ntBASIC5.08□□□□□ -1.6
SCN2BO60939 CBX1P5-201ENST00000475330 559 ntBASIC5.08□□□□□ -1.6
SCN2BO60939 AC058823.1-201ENST00000485315 474 ntBASIC5.08□□□□□ -1.6
SCN2BO60939 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCN2BO60939 CYCSP22-201ENST00000517555 339 ntBASIC5.08□□□□□ -1.6
SCN2BO60939 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.08□□□□□ -1.6
SCN2BO60939 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN2BO60939 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN2BO60939 AP004607.2-201ENST00000533949 322 ntBASIC5.08□□□□□ -1.6
SCN2BO60939 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN2BO60939 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN2BO60939 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.08□□□□□ -1.6
SCN2BO60939 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN2BO60939 AC109583.2-201ENST00000617367 129 ntBASIC5.08□□□□□ -1.6
SCN2BO60939 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN2BO60939 MTCO1P1-201ENST00000624263 1081 ntBASIC5.08□□□□□ -1.6
SCN2BO60939 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN2BO60939 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN2BO60939 FRG1EP-201ENST00000634469 770 ntBASIC5.08□□□□□ -1.6
SCN2BO60939 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN2BO60939 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.08□□□□□ -1.6
SCN2BO60939 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN2BO60939 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SCN2BO60939 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN2BO60939 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN2BO60939 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.08□□□□□ -1.6
SCN2BO60939 SAMMSON-213ENST00000641336 1521 ntBASIC5.07□□□□□ -1.6
SCN2BO60939 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN2BO60939 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN2BO60939 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN2BO60939 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN2BO60939 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.07□□□□□ -1.6
SCN2BO60939 OR9K1P-201ENST00000326513 941 ntBASIC5.07□□□□□ -1.6
SCN2BO60939 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.07□□□□□ -1.6
SCN2BO60939 PTP4A1P1-201ENST00000420539 515 ntBASIC5.07□□□□□ -1.6
SCN2BO60939 SRSF1P1-201ENST00000424058 520 ntBASIC5.07□□□□□ -1.6
SCN2BO60939 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.07□□□□□ -1.6
SCN2BO60939 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.07□□□□□ -1.6
SCN2BO60939 EEF1B2P6-201ENST00000445713 673 ntBASIC5.07□□□□□ -1.6
SCN2BO60939 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN2BO60939 AL672138.1-201ENST00000450604 1015 ntBASIC5.07□□□□□ -1.6
SCN2BO60939 OR52E7P-201ENST00000452394 933 ntBASIC5.07□□□□□ -1.6
SCN2BO60939 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.07□□□□□ -1.6
SCN2BO60939 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SCN2BO60939 AC092754.1-201ENST00000472975 479 ntBASIC5.07□□□□□ -1.6
SCN2BO60939 RN7SL814P-201ENST00000487715 300 ntBASIC5.07□□□□□ -1.6
SCN2BO60939 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.07□□□□□ -1.6
SCN2BO60939 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
SCN2BO60939 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN2BO60939 HMGB1P44-201ENST00000508597 572 ntBASIC5.07□□□□□ -1.6
SCN2BO60939 AC022360.1-201ENST00000521058 340 ntBASIC5.07□□□□□ -1.6
SCN2BO60939 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN2BO60939 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN2BO60939 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN2BO60939 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SCN2BO60939 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN2BO60939 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN2BO60939 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.07□□□□□ -1.6
SCN2BO60939 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.07□□□□□ -1.6
SCN2BO60939 AC100767.2-201ENST00000604840 693 ntBASIC5.07□□□□□ -1.6
SCN2BO60939 AC008115.3-201ENST00000614874 549 ntBASIC5.07□□□□□ -1.6
SCN2BO60939 AC132068.1-201ENST00000623805 459 ntBASIC5.07□□□□□ -1.6
SCN2BO60939 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.07□□□□□ -1.6
SCN2BO60939 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN2BO60939 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
SCN2BO60939 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN2BO60939 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN2BO60939 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN2BO60939 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.07□□□□□ -1.6
SCN2BO60939 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SCN2BO60939 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN2BO60939 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN2BO60939 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN2BO60939 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN2BO60939 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN2BO60939 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN2BO60939 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
SCN2BO60939 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN2BO60939 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SCN2BO60939 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN2BO60939 OR9K1P-202ENST00000641111 3217 ntBASIC5.06□□□□□ -1.6
SCN2BO60939 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN2BO60939 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN2BO60939 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN2BO60939 RNU1-19P-201ENST00000363306 165 ntBASIC5.06□□□□□ -1.6
SCN2BO60939 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN2BO60939 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN2BO60939 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN2BO60939 RPL34P3-201ENST00000421454 338 ntBASIC5.06□□□□□ -1.6
SCN2BO60939 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN2BO60939 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN2BO60939 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN2BO60939 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN2BO60939 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms