Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AL157884.3-201ENST00000448273 1184 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AL451063.1-201ENST00000450164 1133 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 HMGB1P3-201ENST00000502802 616 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC122718.2-201ENST00000505325 591 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 MTCO1P31-201ENST00000506355 492 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC138409.2-202ENST00000507274 458 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC006499.4-201ENST00000510947 694 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 TRIM77BP-201ENST00000524985 1119 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 HMGB1P42-201ENST00000532126 553 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC023310.2-201ENST00000553844 547 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AL121839.1-201ENST00000556233 1185 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC092121.1-201ENST00000569452 202 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 MTND1P8-201ENST00000571424 950 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AP000769.2-201ENST00000602344 396 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC108738.1-201ENST00000603703 237 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC018926.1-201ENST00000616335 435 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 MIR1264-201ENST00000616374 69 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AL133370.2-201ENST00000619934 439 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC091046.2-201ENST00000620775 665 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC019080.5-201ENST00000624891 757 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AL596275.2-207ENST00000641188 675 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 SAMMSON-210ENST00000641260 1308 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC112255.1-201ENST00000624070 2493 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 BCORP1-203ENST00000513194 5093 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 MT-RNR2-201ENST00000387347 1559 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 AC092681.1-201ENST00000297369 291 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 MIR133A2-201ENST00000347538 102 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 RNA5SP394-201ENST00000364216 119 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 RN7SKP275-201ENST00000364626 301 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 RNA5SP131-201ENST00000365452 119 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 ATP5F1P6-201ENST00000402768 767 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 AL356968.2-201ENST00000412769 1257 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 AC079809.1-201ENST00000415468 276 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 ARL2BPP3-201ENST00000421226 480 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 CDY8P-201ENST00000428380 1279 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 MRPL50P1-201ENST00000431951 384 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 AL645638.1-201ENST00000440519 361 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 IGBP1P3-201ENST00000447449 1000 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 CDY20P-201ENST00000447528 1279 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 RN7SL188P-201ENST00000469842 285 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 SNRPCP3-201ENST00000474888 476 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 NPM1P17-201ENST00000479221 602 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 RPL37P23-201ENST00000492641 294 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 RPEP1-201ENST00000504507 658 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 OR8G3P-201ENST00000533406 921 ntBASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.63□□□□□ -1.51
TCRBV7S3A2A0A539 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms