Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AL731556.1-201ENST00000394628 3711 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AL359715.4-201ENST00000606629 1436 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 HSPD1P14-201ENST00000432666 1618 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 GAPDHP24-201ENST00000328713 983 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 RNA5SP394-201ENST00000364216 119 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 MTCO2P8-201ENST00000412213 658 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC092447.3-201ENST00000426027 686 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AL160175.1-201ENST00000428124 247 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AL445928.1-201ENST00000435545 222 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AL627308.1-201ENST00000435693 821 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 OR13K1P-201ENST00000444577 975 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 DUXAP8-207ENST00000456786 622 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC073594.1-201ENST00000462065 364 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC068587.2-201ENST00000478386 781 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC104982.1-201ENST00000478775 574 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 SYT14P1-201ENST00000481459 721 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC099521.1-201ENST00000482557 334 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 RN7SL423P-201ENST00000486202 304 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC138866.2-201ENST00000508650 584 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC002456.2-201ENST00000509356 380 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC040904.1-201ENST00000590850 223 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC008536.1-201ENST00000602872 669 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 DUXAP10-204ENST00000612052 616 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC078880.5-201ENST00000617845 421 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 MIR6719-201ENST00000622428 87 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC068787.1-201ENST00000623908 691 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC120349.3-201ENST00000624377 529 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AP000550.3-201ENST00000637734 379 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC083837.1-201ENST00000565297 2994 ntBASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
CCDC187A0A096LP49 HDAC1P2-201ENST00000453661 1398 ntBASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 RN7SKP162-201ENST00000363605 345 ntBASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 RNU6-354P-201ENST00000383862 107 ntBASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 RNU6-610P-201ENST00000384264 107 ntBASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 RNA5SP105-201ENST00000391123 113 ntBASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 AL355615.1-201ENST00000406187 641 ntBASIC5.67□□□□□ -1.5
CCDC187A0A096LP49 RPS3AP25-201ENST00000411660 793 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms