Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 RN7SL165P-201ENST00000477476 291 ntBASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 RPL23AP37-201ENST00000479658 549 ntBASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AP002453.1-201ENST00000492327 668 ntBASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AC095052.1-201ENST00000509955 863 ntBASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 KHDC1P1-201ENST00000511053 508 ntBASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 PRELID3BP4-201ENST00000515476 571 ntBASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AC084337.1-201ENST00000524809 686 ntBASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AP001804.1-201ENST00000526868 919 ntBASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 DUXAP3-201ENST00000603616 594 ntBASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AL157899.1-201ENST00000604110 936 ntBASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AC019226.2-201ENST00000625973 424 ntBASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHGA6Q9Y5G7 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 CCT8P1-201ENST00000413611 1657 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AC119674.1-213ENST00000641177 1386 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 MIR525-201ENST00000384978 85 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 MIR513B-201ENST00000385136 84 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 SNORA77.2-201ENST00000408571 112 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 RN7SKP108-201ENST00000411367 328 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 TMA16P2-201ENST00000413187 601 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 BTF3P8-201ENST00000414577 526 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 CYCSP11-201ENST00000436426 315 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 OTX2P1-201ENST00000450956 354 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AC021106.1-201ENST00000509020 1058 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 OR5AM1P-201ENST00000532136 1032 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AC036111.2-201ENST00000533247 901 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 POLR2KP1-201ENST00000553226 168 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AC004890.3-201ENST00000605566 1095 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 VN1R74P-201ENST00000613259 503 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 AC021106.3-201ENST00000623925 531 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 MSL3P1-202ENST00000440028 1468 ntBASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA6Q9Y5G7 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms