Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 SNORA17A-201ENST00000391185 133 ntBASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 AL359643.1-201ENST00000404109 423 ntBASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 OR6E1P-201ENST00000414424 923 ntBASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 OR6D1P-201ENST00000436165 939 ntBASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 GTF3AP5-201ENST00000442645 697 ntBASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 YWHAEP1-201ENST00000453697 763 ntBASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 UGT2A3P7-201ENST00000510485 734 ntBASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 AC130364.2-201ENST00000528639 604 ntBASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 AC022404.1-201ENST00000555320 273 ntBASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 AC012616.1-201ENST00000600294 197 ntBASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 Z95327.3-201ENST00000610385 572 ntBASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 AC026124.2-201ENST00000621847 656 ntBASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 SNORA17.5-201ENST00000630429 132 ntBASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.97□□□□□ -1.61
TRAPPC4Q9Y296 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.61
TRAPPC4Q9Y296 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
TRAPPC4Q9Y296 OR4G1P-202ENST00000641173 1788 ntBASIC4.96□□□□□ -1.61
TRAPPC4Q9Y296 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
TRAPPC4Q9Y296 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TRAPPC4Q9Y296 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 RN7SKP28-201ENST00000364770 305 ntBASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 UBBP2-201ENST00000376781 231 ntBASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 GAPDHP34-201ENST00000432112 823 ntBASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 AL161722.1-201ENST00000446972 1032 ntBASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 RNA5SP103-201ENST00000459503 118 ntBASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 AC091912.1-201ENST00000511351 248 ntBASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 MIR1273E-201ENST00000581165 102 ntBASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 AC132068.1-201ENST00000623805 459 ntBASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 AP005432.1-201ENST00000580891 3485 ntBASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 AC116158.1-201ENST00000560231 2129 ntBASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAPPC4Q9Y296 GVINP1-202ENST00000531871 7271 ntBASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 AC011447.7-201ENST00000624228 1590 ntBASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 AC144833.1-201ENST00000567953 4089 ntBASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 AC017079.1-201ENST00000333650 415 ntBASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 OR1L6-202ENST00000373684 1044 ntBASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms