Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC011447.2-201ENST00000592921 283 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 EIF1P6-201ENST00000600054 334 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC073091.2-201ENST00000603205 907 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 NDUFB9P1-201ENST00000604683 510 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC073569.3-201ENST00000619055 682 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 MTND4LP32-201ENST00000636111 270 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 AC022819.1-201ENST00000563495 3910 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 Z93929.1-201ENST00000418200 1475 ntBASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC8.88□□□□□ -0.99
PDZRN3Q9UPQ7 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 RN7SKP130-201ENST00000364924 301 ntBASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 RNU6-157P-201ENST00000383957 107 ntBASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 RN7SKP62-201ENST00000384539 329 ntBASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 RPL23AP85-201ENST00000421838 433 ntBASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AC128677.1-201ENST00000436016 442 ntBASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 ST13P20-201ENST00000447996 1065 ntBASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AL096803.1-201ENST00000456921 1021 ntBASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 CBX1P5-201ENST00000475330 559 ntBASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AC079203.1-201ENST00000487972 404 ntBASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 B3GNTL1P1-201ENST00000509174 289 ntBASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 SCARNA6-201ENST00000515982 265 ntBASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AL159169.2-201ENST00000610061 1269 ntBASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 AC025594.3-201ENST00000613068 790 ntBASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 MIR6806-201ENST00000622141 64 ntBASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 RACK1-235ENST00000626067 564 ntTSL 2 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PDZRN3Q9UPQ7 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AC092725.2-201ENST00000567658 1389 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 DDX43P1-201ENST00000510713 1763 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AC087359.1-201ENST00000508335 1740 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 FAM3C2-201ENST00000312214 681 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 RPL21P111-201ENST00000418453 477 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 ZDHHC20P2-201ENST00000424108 429 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 UQCRHP1-204ENST00000424609 274 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 AC069154.1-201ENST00000432914 542 ntBASIC8.86□□□□□ -0.99
PDZRN3Q9UPQ7 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms