Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 AC079395.2-201ENST00000610982 737 ntBASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 MIR6133-201ENST00000617057 108 ntBASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 AC018445.2-201ENST00000622987 260 ntBASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 AC138965.3-201ENST00000623875 498 ntBASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 AC021766.1-201ENST00000624404 741 ntBASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 CASC19-248ENST00000641674 1356 ntBASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CTNNA3Q9UI47 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 RN7SKP162-201ENST00000363605 345 ntBASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 U3.7-201ENST00000363668 216 ntBASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 NPM1P4-201ENST00000414095 812 ntBASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 AC007394.1-201ENST00000421941 531 ntBASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 AC012075.1-201ENST00000436549 580 ntBASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 GAPDHP58-201ENST00000438477 1006 ntBASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 AC105399.1-202ENST00000447303 205 ntBASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 SIAH1P1-201ENST00000479411 923 ntBASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 HMGB1P44-201ENST00000508597 572 ntBASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 AC109464.1-201ENST00000511091 819 ntBASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 AC044860.2-201ENST00000561005 179 ntBASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 MIR7853-201ENST00000584820 132 ntBASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 AC007786.3-201ENST00000615154 596 ntBASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 AF117829.2-201ENST00000619538 361 ntBASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CTNNA3Q9UI47 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 AC092376.2-201ENST00000622621 4116 ntBASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 CBX1P3-201ENST00000413296 527 ntBASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 AL136231.1-201ENST00000429407 730 ntBASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 RNA5SP230-201ENST00000517039 122 ntBASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 AC060766.1-201ENST00000590824 627 ntBASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 AL139041.1-201ENST00000605480 610 ntBASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 HSPA8P14-201ENST00000552265 1805 ntBASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CTNNA3Q9UI47 AL121839.2-201ENST00000565058 6943 ntBASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CTNNA3Q9UI47 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms