Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 C1DP4-201ENST00000455429 424 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC103563.5-201ENST00000455643 364 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 VN1R6P-201ENST00000458417 907 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 OR9A1P-202ENST00000484361 945 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 RPS27P23-201ENST00000487608 251 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 NPM1P27-201ENST00000502784 830 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 OR5M4P-201ENST00000529436 925 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC006065.2-201ENST00000536978 211 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 CHEK2P2-201ENST00000554701 672 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC090607.2-201ENST00000560331 695 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC091932.1-201ENST00000569381 427 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC011712.1-201ENST00000588959 234 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AL035413.2-201ENST00000604801 525 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AL050343.2-201ENST00000607338 280 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC243830.2-201ENST00000618067 630 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC006504.8-201ENST00000621046 635 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AL160413.1-201ENST00000622780 310 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC139792.3-201ENST00000623525 224 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC145207.9-201ENST00000623802 325 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AL683826.1-201ENST00000624104 627 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AL162377.2-201ENST00000624532 337 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 SAMMSON-227ENST00000642114 1199 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 PARP1P1-201ENST00000413631 3026 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 RNU4-79P-201ENST00000362764 141 ntBASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 RNU6-767P-201ENST00000384132 107 ntBASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 H2AFZP3-201ENST00000394213 387 ntBASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 SPA17P1-201ENST00000416656 452 ntBASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 SNRPEP7-201ENST00000438350 220 ntBASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 LIN28AP2-201ENST00000445283 458 ntBASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 RPL23AP20-201ENST00000447965 421 ntBASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 AC079448.1-201ENST00000449377 373 ntBASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 AC097493.1-201ENST00000463958 372 ntBASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 AP003122.4-201ENST00000530980 758 ntBASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 ANKRD20A19P-203ENST00000602724 295 ntBASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LIMD1Q9UGP4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms