Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PPARGC1AQ9UBK2 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
PPARGC1AQ9UBK2 AC119674.1-213ENST00000641177 1386 ntBASIC6.56□□□□□ -1.36
PPARGC1AQ9UBK2 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.56□□□□□ -1.36
PPARGC1AQ9UBK2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PPARGC1AQ9UBK2 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 DDX18P5-201ENST00000534547 1306 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 YES1P1-201ENST00000418510 1628 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 CASC19-246ENST00000641625 1606 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 Y_RNA.436-201ENST00000384097 102 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AL138880.1-201ENST00000405824 642 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 RNA5SP115-201ENST00000411160 107 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 MTND4P20-201ENST00000424125 869 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 RPF2P1-201ENST00000424137 906 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 RPS4XP16-201ENST00000427198 791 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 ARL4AP3-201ENST00000441452 574 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 POU5F1P5-201ENST00000445059 658 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 CASP3P1-201ENST00000446037 609 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC104978.1-201ENST00000449387 391 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 OR51B8P-201ENST00000449892 769 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 MTCO3P16-201ENST00000454456 754 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC244505.3-201ENST00000454598 187 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 RN7SL369P-201ENST00000477138 299 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 RPL29P23-201ENST00000486188 442 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 RN7SL714P-201ENST00000487050 298 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC010343.2-201ENST00000510162 224 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC108120.2-201ENST00000512973 294 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC119751.1-201ENST00000513357 765 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AP005639.1-201ENST00000526939 192 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC006518.2-201ENST00000542513 940 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 LYZ-203ENST00000549690 669 ntTSL 2 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC023813.2-201ENST00000564321 469 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC005332.4-201ENST00000592752 579 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC024589.2-201ENST00000605642 1294 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AP003497.2-201ENST00000624220 967 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 OR7E91P-202ENST00000642062 1198 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AP003486.1-201ENST00000525716 3994 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC005225.5-201ENST00000623547 2225 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 AC003985.2-201ENST00000562268 1669 ntBASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PPARGC1AQ9UBK2 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 SPATA2P1-201ENST00000431223 2055 ntBASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 ZNF736P9Y-201ENST00000439586 1345 ntBASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 OR56A4-201ENST00000330728 1209 ntBASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 FUNDC2P3-201ENST00000334716 533 ntBASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 RNU4-24P-201ENST00000364565 139 ntBASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 DNAJC19P6-201ENST00000401853 280 ntBASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 AL139805.1-201ENST00000407837 289 ntBASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 AC116036.1-201ENST00000412199 367 ntBASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 USP9YP26-201ENST00000421008 661 ntBASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 AL365203.2-201ENST00000423444 196 ntBASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 OSTCP4-201ENST00000424397 449 ntBASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.54□□□□□ -1.36
PPARGC1AQ9UBK2 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms