Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC092470.1-201ENST00000546187 132 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 NACA-204ENST00000546392 802 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 C6orf229-201ENST00000565469 814 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 RN7SL408P-201ENST00000577207 296 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC004147.5-201ENST00000581727 536 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC016727.1-205ENST00000605437 569 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AL096855.2-201ENST00000605785 369 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC128687.2-201ENST00000609657 566 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 CGA-202ENST00000610310 615 ntTSL 3 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AC126175.1-201ENST00000617041 758 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 AL662791.5-202ENST00000623946 461 ntTSL 2 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 NBPF12-207ENST00000617864 2051 ntTSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 ZNF559-211ENST00000592504 1398 ntTSL 2 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 BMPR1APS1-201ENST00000403332 1598 ntBASIC9.58□□□□□ -0.88
RTN4Q9NQC3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RTN4Q9NQC3 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 RNU6-108P-201ENST00000365558 107 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 RNU6-1207P-201ENST00000384343 107 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 TDRKH-AS1-201ENST00000389897 992 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 PRH2-202ENST00000396400 673 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 RPL5P20-201ENST00000403848 896 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 LINC01238-201ENST00000416204 590 ntTSL 2 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC016831.2-201ENST00000417179 352 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 NMD3P2-201ENST00000421815 761 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 RPSAP17-201ENST00000437336 883 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 RPL7AP50-201ENST00000452821 795 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC073476.1-201ENST00000452854 407 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AL683842.1-201ENST00000455505 525 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC073089.1-201ENST00000457546 214 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 RNU6-261P-201ENST00000459506 102 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AL672142.1-201ENST00000482796 378 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 RPL7AP11-201ENST00000486538 799 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC114786.4-201ENST00000508771 728 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 PPIAP11-201ENST00000510729 493 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC138907.7-202ENST00000565347 540 ntTSL 4 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 MPHOSPH6-207ENST00000569021 392 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC141257.2-201ENST00000569199 540 ntTSL 5 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC135048.2-201ENST00000572471 561 ntTSL 4 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 SKA2-203ENST00000578105 689 ntTSL 2 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC015818.6-201ENST00000584274 634 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 RPL26P30-202ENST00000602923 645 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC140658.6-201ENST00000603958 201 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC112230.1-201ENST00000604342 547 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AP003117.2-201ENST00000606010 545 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AL080285.2-201ENST00000612765 458 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 HOXA11-AS1_2.1-201ENST00000615604 187 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 BSNDP3-201ENST00000617487 364 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 Z97987.1-201ENST00000618051 433 ntTSL 3 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 Metazoa_SRP.126-201ENST00000618354 266 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 RN7SL575P-201ENST00000620774 299 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 LINC00622-201ENST00000562811 1570 ntBASIC9.57□□□□□ -0.88
RTN4Q9NQC3 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
RTN4Q9NQC3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms