Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 U3.4-201ENST00000363352 213 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 RNU1-24P-201ENST00000364285 165 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 Y_RNA.516-201ENST00000384541 124 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AC026310.1-201ENST00000396004 378 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AL035419.1-201ENST00000397037 564 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 RNA5SP155-201ENST00000411154 129 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 RN7SKP142-201ENST00000411236 328 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 USP9YP33-201ENST00000412220 421 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 CDC42P6-201ENST00000421246 576 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 RPS7P12-201ENST00000422385 582 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AL022400.1-201ENST00000423946 935 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 GCA-203ENST00000429691 824 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 OFD1P13Y-201ENST00000431179 1232 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 OR2B8P-201ENST00000432841 938 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 NEK4P1-201ENST00000433383 879 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AL590103.1-201ENST00000434488 307 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AL022324.2-201ENST00000434827 780 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 PA2G4P1-201ENST00000442248 1197 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 CRYGGP-201ENST00000443337 145 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AC091959.2-201ENST00000477363 321 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 CDC42P4-201ENST00000510507 563 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 OR5H7P-201ENST00000514084 930 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AP001804.2-201ENST00000533932 910 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AC007954.1-201ENST00000554198 494 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 RN7SL66P-201ENST00000582099 264 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 RPL7AP69-201ENST00000595306 806 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 WBP1LP12-201ENST00000604449 331 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AC128687.1-201ENST00000605304 619 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AL451074.6-201ENST00000608512 729 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AP000238.1-201ENST00000608759 426 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 DLEU2_1.1-201ENST00000612089 120 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AC100793.4-201ENST00000613683 429 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 DLEU2_1.2-201ENST00000614667 120 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AC008083.4-201ENST00000615076 444 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AC131009.3-201ENST00000621809 287 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AC061999.1-201ENST00000624454 177 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 MKI67P1-201ENST00000604297 1460 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 AC079949.2-201ENST00000617117 2933 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 DDX18P6-201ENST00000450119 1997 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AL033543.1-201ENST00000623440 13454 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC119674.1-204ENST00000641348 1343 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC090181.3-201ENST00000624777 1514 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms