Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC090236.2-201ENST00000587933 1101 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AC068020.1-201ENST00000594215 661 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AC130352.1-201ENST00000602979 661 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AC021851.1-201ENST00000608537 1082 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AC019131.2-201ENST00000609071 870 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.46□□□□□ -1.38
HPS3Q969F9 MIR6793-201ENST00000612376 63 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AC008147.4-201ENST00000617570 1204 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.46□□□□□ -1.38
HPS3Q969F9 AC022400.9-201ENST00000623633 273 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AC027088.4-201ENST00000611559 1947 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HPS3Q969F9 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.46□□□□□ -1.38
HPS3Q969F9 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
HPS3Q969F9 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HPS3Q969F9 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HPS3Q969F9 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HPS3Q969F9 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HPS3Q969F9 RNU2-17P-201ENST00000410290 190 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.45□□□□□ -1.38
HPS3Q969F9 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 AC242426.1-201ENST00000435270 960 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 RPL7P33-201ENST00000444159 742 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HPS3Q969F9 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.45□□□□□ -1.38
HPS3Q969F9 HLA-DPA3-207ENST00000454398 229 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.45□□□□□ -1.38
HPS3Q969F9 AC018638.3-201ENST00000461273 132 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 AC098583.1-201ENST00000480875 255 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 TRAV31-201ENST00000502780 342 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 OR5H3P-201ENST00000502817 919 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 LSM3P4-201ENST00000502948 309 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.45□□□□□ -1.38
HPS3Q969F9 AC118282.1-201ENST00000506408 765 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.45□□□□□ -1.38
HPS3Q969F9 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HPS3Q969F9 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.45□□□□□ -1.38
HPS3Q969F9 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.45□□□□□ -1.38
HPS3Q969F9 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.45□□□□□ -1.38
HPS3Q969F9 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.45□□□□□ -1.38
HPS3Q969F9 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.45□□□□□ -1.38
HPS3Q969F9 AL121594.4-201ENST00000556211 1196 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 AC084759.1-201ENST00000561168 290 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 AL136131.3-201ENST00000607600 188 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 RNU6-1192P-201ENST00000612197 107 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.45□□□□□ -1.38
HPS3Q969F9 AL031658.2-201ENST00000616850 651 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 RNU6-489P-201ENST00000618289 107 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HPS3Q969F9 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.45□□□□□ -1.38
HPS3Q969F9 AC024884.1-201ENST00000620583 399 ntBASIC6.45□□□□□ -1.38
HPS3Q969F9 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.45□□□□□ -1.38
HPS3Q969F9 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.45□□□□□ -1.38
HPS3Q969F9 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.45□□□□□ -1.38
HPS3Q969F9 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.45□□□□□ -1.38
HPS3Q969F9 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.45□□□□□ -1.38
HPS3Q969F9 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.45□□□□□ -1.38
HPS3Q969F9 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HPS3Q969F9 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HPS3Q969F9 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HPS3Q969F9 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
HPS3Q969F9 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.44□□□□□ -1.38
HPS3Q969F9 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
HPS3Q969F9 AC104964.3-201ENST00000606115 2860 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.44□□□□□ -1.38
HPS3Q969F9 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HPS3Q969F9 AC232271.1-201ENST00000602455 2715 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 MTND5P11-201ENST00000511037 1812 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
HPS3Q969F9 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
HPS3Q969F9 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
HPS3Q969F9 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.44□□□□□ -1.38
HPS3Q969F9 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
HPS3Q969F9 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HPS3Q969F9 RNA5SP91-201ENST00000390902 119 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HPS3Q969F9 RN7SKP240-201ENST00000410583 375 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.44□□□□□ -1.38
HPS3Q969F9 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.44□□□□□ -1.38
HPS3Q969F9 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.44□□□□□ -1.38
HPS3Q969F9 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.44□□□□□ -1.38
HPS3Q969F9 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.44□□□□□ -1.38
HPS3Q969F9 AC114973.1-201ENST00000429057 632 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.44□□□□□ -1.38
HPS3Q969F9 AC096775.1-201ENST00000437724 448 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 EIF5AP4-201ENST00000441206 465 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 AC015983.1-201ENST00000441577 373 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.44□□□□□ -1.38
HPS3Q969F9 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.44□□□□□ -1.38
HPS3Q969F9 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.44□□□□□ -1.38
HPS3Q969F9 TPT1P3-201ENST00000492841 512 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 RN7SL57P-201ENST00000493687 290 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.44□□□□□ -1.38
HPS3Q969F9 ST13P12-201ENST00000508958 1094 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 UGT2A3P7-201ENST00000510485 734 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HPS3Q969F9 AC139365.2-201ENST00000517972 253 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 AC010476.1-201ENST00000519111 851 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 WBP1LP3-201ENST00000523033 208 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms