Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 OR56A4-201ENST00000330728 1209 ntBASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 PPIAP9-201ENST00000403866 498 ntBASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 AC244453.4-201ENST00000419150 388 ntBASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 AL662874.1-201ENST00000426065 230 ntBASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 Z84478.1-201ENST00000438230 1219 ntBASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 AGGF1P3-201ENST00000493675 1213 ntBASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 AC021106.1-201ENST00000509020 1058 ntBASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 RNU6-751P-201ENST00000516382 101 ntBASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 RN7SKP99-201ENST00000517028 307 ntBASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 NANOGNBP2-201ENST00000544753 553 ntBASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 AC006363.1-201ENST00000603806 463 ntBASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 AC010632.3-201ENST00000611377 369 ntBASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 AC008115.3-201ENST00000614874 549 ntBASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 AL391597.1-201ENST00000618707 694 ntBASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRAF3IP1Q8TDR0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AC010266.2-201ENST00000564741 3255 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 RNA5SP510-201ENST00000364697 99 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 RNU4-2-201ENST00000365668 141 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 RNU6-891P-201ENST00000384280 111 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 IPPKP1-201ENST00000422501 768 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AKR1B10P1-201ENST00000425765 942 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 MTCO1P51-201ENST00000427672 1060 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 OR6D1P-201ENST00000436165 939 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AL138787.1-202ENST00000437804 898 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 LDHBP2-201ENST00000456969 1005 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 UBFD1P1-201ENST00000473259 814 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 NPM1P28-201ENST00000492269 840 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AC091912.1-201ENST00000511351 248 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AC019322.1-201ENST00000571869 389 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 FAM60CP-201ENST00000591086 664 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AL365181.4-201ENST00000609800 547 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AL162574.1-201ENST00000615702 950 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 AC073869.8-201ENST00000641806 335 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 MTND5P23-201ENST00000430812 1655 ntBASIC5.68□□□□□ -1.5
TRAF3IP1Q8TDR0 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms