Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AC018552.1-201ENST00000562099 811 ntBASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AC011840.5-201ENST00000582125 771 ntBASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 AC007275.1-201ENST00000621243 671 ntBASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 ZNF733P-202ENST00000444809 1573 ntBASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.07□□□□□ -1.28
SMC1BQ8NDV3 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 SRRM1P3-201ENST00000426911 2678 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AL391261.1-201ENST00000555712 1479 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AC005294.1-201ENST00000355509 281 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 MIR541-201ENST00000401360 84 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 MTCO2P8-201ENST00000412213 658 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 MTND1P26-201ENST00000440488 538 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AC093166.4-201ENST00000457867 318 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 RN7SL51P-201ENST00000468230 285 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 RN7SL738P-201ENST00000470264 297 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 RPS18P6-201ENST00000476880 458 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AC083982.1-201ENST00000485679 344 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AC008629.2-201ENST00000503783 483 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 PRELID3BP6-201ENST00000503839 571 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AC096571.1-202ENST00000506634 735 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 MTND2P32-201ENST00000521584 1038 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AC106730.2-201ENST00000566641 540 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AC112220.2-201ENST00000605513 533 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AC026741.1-201ENST00000605892 482 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 FAM25E-202ENST00000608562 189 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AP001033.2-201ENST00000609701 1003 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AP002799.1-201ENST00000623552 423 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 OR5AC4P-202ENST00000642086 985 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AC006600.2-201ENST00000624834 2506 ntBASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SMC1BQ8NDV3 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 UGT2B27P-201ENST00000505092 1620 ntBASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 AC024587.1-201ENST00000505925 2157 ntBASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 RPL7P58-201ENST00000402913 758 ntBASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 NIFKP3-201ENST00000417799 865 ntBASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.05□□□□□ -1.28
SMC1BQ8NDV3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms